Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0723 ATGGAGACCTCAACTTCAATGCCCATAGGTTATAGATTCAGACCAACAGATGAAGAACTTGTGAGTCACTACCTAAATCACAAGTTGCTTGGTAATGATGCGATTGTCAATAACGTAATAGCTGATGTTGATTTTTTAGGCTCTGCACCATGGGATTTACCAGCATTGTCCAAGGTGAAATCGGATGACAAAGAATGGTTTTTCTTCACTTGCCTTGATCCCATGAAGTCCACCAAAAGCAAAACAAGGTTTAATAGAAAAACCAATATCAAACCTGAAACCGAAACCAAAACCAAAACCAAAGATGGTTATTGGAAGATCACCGGTAAAGATCGTGAAATCAAGACAAAAGGTACCAACATTGTAATAGGCATAAAAAAGACTCTTGTTTTCTATGGTAATCAACATGAAAAGACCAACTGGGTTATGCATGAGTATCATTCCTTTCCTGATAACAAGGCATGTGCTTCCCCTCCTCGATTGGATATGGAATATTTCTTTCCAGAAACACCGATTGAAGAGGAGTGTAGCATAAAATCACTGCTAAAACCAACCAGTCTTGAGAACGAAAACGGCATTGGACACGATCAACCTGAAGCTTTTGAAGAGGACAGTGCTGATGATTCTTCGTTCGTTGATTCAATTTTGAACGATGGTGTTTCAATTAGTAAAGAAACAAGTTAA 684 0.3845 METSTSMPIGYRFRPTDEELVSHYLNHKLLGNDAIVNNVIADVDFLGSAPWDLPALSKVKSDDKEWFFFTCLDPMKSTKSKTRFNRKTNIKPETETKTKTKDGYWKITGKDREIKTKGTNIVIGIKKTLVFYGNQHEKTNWVMHEYHSFPDNKACASPPRLDMEYFFPETPIEEECSIKSLLKPTSLENENGIGHDQPEAFEEDSADDSSFVDSILNDGVSISKETS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0723 227 Gene3D NAC domain 16 169 IPR036093 GO:0003677|GO:0006355
Mtr8g0723 227 MobiDBLite consensus disorder prediction 187 209 - -
Mtr8g0723 227 ProSiteProfiles NAC domain profile. 7 184 IPR003441 GO:0003677|GO:0006355
Mtr8g0723 227 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 9 166 - -
Mtr8g0723 227 Pfam No apical meristem (NAM) protein 8 147 IPR003441 GO:0003677|GO:0006355
Mtr8g0723 227 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 166 - -
Mtr8g0723 227 SUPERFAMILY NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0723 Mtr-Chr8 8680433 8685391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0723 6 148 NAC Transcription Factor Family AT1G33060 49.315 6.59e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g0723 NAM 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0723 - - mtr:MTR_8g023880 441.039