Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0722 ATGACAACCTTATTTCCTCCGACTCTTGACCATGTTCCTGTTGGATTCAGATTCCGACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAAAAAGTTACTTGGTAATGATTCCATTGTAAACAATGTTATAGCTGAAGTTGATGTATGCAACTATGAACCTTGGGACTTACCAGCTTTTTCGGTTGTAAAATCAGATGACCCAGAATGGTTTTTTTTGTGTCCTATTGATTATAAGTATGCCAAGAGTAAAAGGTTTAAGAGGACAACAAATACTGGTTTTTGGAAAGCTACTGGTAAGGACCGGAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACTCTTGTTTACTACAATGGTCGTGTTCCTGGTGTTAAAAGCAGCTGGGTGATTCATGAATATCATGATACCACCTTTGAAGATGACAAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGAAGCAGATATACATGATGAAGGGGAGCCAAGTAGACACATGAGTTCTGACCATGAAAGTCAAGAAATTTTTGAAGGAATTCCTGATGTGAGTGAAACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGAAGAAAATTTCTTTCCTTTCTCACCACAACAGTCTTCAATCTCTGAAAATGAGCAGGAAGTATCAATCCCAAACTCACGACTTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTAAAACTATTGAAGAGGAAGATAAGTTCATCAGTTCAATGATTATTGACGGGGATTTGGACAGCGGTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACACCGTGTGGCGATATTCTTGATACTTCAACGGCATTTCTTGAACATCCTAGTTCAGGCGAATACTGTGCATCAAAATTGTTGAAATCAACACATGGTAATGTTCATGGAAGCACCTGTTTTCAATCTTTAAAGAACGGTGAAATTGAAGACAACAACGAGAGTACCTTTCAAGATTATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATACCTTTGGAGATGATCAATTGTATTAAAATATCTAGTTCGCCTTCCACTCTAAGAAAACACAAAAACCAGTATCATCCAAGACCAGCCATCTTCATGTCAAAAAGAGCTGCTTCAAAAAGATCTTGA 1260 0.3802 MTTLFPPTLDHVPVGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCNYEPWDLPAFSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNTGFWKATGKDRKIKVRGSNNIIGIKKTLVYYNGRVPGVKSSWVIHEYHDTTFEDDKRTFVLCRLMKKAEKKAEKEAEADIHDEGEPSRHMSSDHESQEIFEGIPDVSETLPEINMESIFQAQEENFFPFSPQQSSISENEQEVSIPNSRLHDAYFRNDNIIVQSPFKTIEEEDKFISSMIIDGDLDSGHVQSESLKMVYYGSSDTDAEVVSTPCGDILDTSTAFLEHPSSGEYCASKLLKSTHGNVHGSTCFQSLKNGEIEDNNESTFQDYFGGLEASSCDSTADIPLEMINCIKISSSPSTLRKHKNQYHPRPAIFMSKRAASKRS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0722 419 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Mtr8g0722 419 Gene3D NAC domain 21 164 IPR036093 GO:0003677|GO:0006355
Mtr8g0722 419 MobiDBLite consensus disorder prediction 165 188 - -
Mtr8g0722 419 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Mtr8g0722 419 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Mtr8g0722 419 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 286 - -
Mtr8g0722 419 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0722 Mtr-Chr8 8672257 8675090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0722 8 163 NAC Transcription Factor Family AT4G35580 53.086 2.83e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g0722 NAM 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0722 - - mtr:MTR_8g023840 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0722 8 8672257 8675090 Mtr8g0722 8 8672257 8675090 ECH