Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0721 ATGACAAACTCATTTCCTCATAACTATGACGTTCCTGTTGGATTCAGATTCCGACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAAAAAGTTACTTGGTAATGATTCCATTGTCAACAATGTTATAGCTGAAGTTGATGTATGCAAGTTCGAACCTTGGGATTTACCAGCTTGTTCTTTGATAAAATCCAATGATCCCGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACACAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGCACTGACAATGTTATTGGGATAAAAAAAACACTTGTGTTCTATAATGGTTGTGTTCCTGGTGTTAAAAGCAACTGGGTGATTCATGAATATCATTCTGCCACCTTTCATGATAACCAGAGGACTTTTGTTTTGTGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAGAGGAAATTGATAGAATGATATGTGATGAAGGGGAGCCTAGTCGACACATGAGTTCCGATCACGAAAATCAAGAAACAGTTGAAGGAATTCCTGATGTAATAAGTGGTACCTTGCTTGAAAAGAATATGGAACCAATGTTTCAGGAACCTCATCAGGCCGAAAATTACTTTCCTTTCTCAACATACCAGCCTTCAATCTCTGAAAATGAGAACGAAGTATCTTTATCGAACTCAGGATTTTATGATTCTGAAAGTGGTCACATCGATATGCAGAGTCCGTTTGAAACTATTGAAGAGGAAAATCAGTTCATTAATTCGATGTTAAATGACGGATATTTTGTTAATAGCGAAAAAATAAGACACACTTTTGTCAACTTTCCTGTCCAGTCCAAGTCGTTGAGAATGATCGACTATGGAAGCAGTGACACAGATGCTGAATTAGTCTCTAAGCCGTGTCGCAATGTTCTGGATACTTCAACGGCGTTTCTTGAGCATCCTAGCTCAAGCGAATACTATGCATCATTTCGAAATGATTTCGGGGGATTGGAGGCATCCTCTTGTGACTCATCTGCAGATAAACCTCTAGAGATGATCAATTGTTTTGAAATTTCTAGTGCACCTTCCACTCTAAGAAGAAACAAAAACCAGTATCATCCAAGACCAGCCACCTTCATGTCAAAAAGAGCTGCTTCAAGAATATCTCAAACATAG 1203 0.3857 MTNSFPHNYDVPVGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCKFEPWDLPACSLIKSNDPEWFFFCPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGIKKTLVFYNGCVPGVKSNWVIHEYHSATFHDNQRTFVLCRLMKKAEKKAEEEIDRMICDEGEPSRHMSSDHENQETVEGIPDVISGTLLEKNMEPMFQEPHQAENYFPFSTYQPSISENENEVSLSNSGFYDSESGHIDMQSPFETIEEENQFINSMLNDGYFVNSEKIRHTFVNFPVQSKSLRMIDYGSSDTDAELVSKPCRNVLDTSTAFLEHPSSSEYYASFRNDFGGLEASSCDSSADKPLEMINCFEISSAPSTLRRNKNQYHPRPATFMSKRAASRISQT* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0721 400 SUPERFAMILY NAC domain 7 158 IPR036093 GO:0003677|GO:0006355
Mtr8g0721 400 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Mtr8g0721 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 10 286 - -
Mtr8g0721 400 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 286 - -
Mtr8g0721 400 MobiDBLite consensus disorder prediction 375 400 - -
Mtr8g0721 400 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Mtr8g0721 400 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0721 Mtr-Chr8 8658165 8660270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0721 11 162 NAC Transcription Factor Family AT4G35580 58.491 3.54e-56 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr8g0721 NAM 6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0721 - - mtr:MTR_8g023840 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0721 8 8658165 8660270 Mtr8g0721 8 8658165 8660270 ECH