Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0713 ATGAGATCAACATCAAACCAACCCTCCAACCCTTCTTCCAAAAACTACTTATTTTTCTCCAAACTAATGTCCTCTTTCAAAAAAACTACCTTTTTTCTAACCTTATTCATTGTCCATGTCTCTTCTTCTTGTAACCAACTTGACAAAGATTCTCTCTTATCTTTCTCTTCAAATTTCTCATCTTTTTCACCTCACCTACCACCTCTTAACTGGTCTTCTTCCATTGATTGTTGCAGTTGGGAAGGTATAACTTGTGATCAAAATAATCACCATGTTACACATCTTTTCTTACCTTCTAGAGGACTCACTGGTTTCATTTCATTTTCTCTTTTAACTTCCCTTGAATCTCTTTCTCATCTTAATCTTTCACATAATAGATTTTATGGTAATCTTCAAAATCACTTTTTTGATCTTCTTAATCATCTTTTAGTCCTTGATTTGAGTTATAATCACTTCTCTTCTGAATTACCAACTTTTGTTAAACCTAGCAATGGAACTGGAACTGGAAATAGTAGTGTTATTCAGGAATTGGATTTGTCTAGTAATTCATTCAATGGAACATTACCAGTTTCTCTGATTCAGTATCTTGAAGAAGGAGGGAATTTGATTTCTTTCAATGTAAGTAACAACAGTTTCACAGGTCCAATTCCAATTTCAATCTTTTGTGTTAATCAATTGAACAATTCTGCTATAAGATTCTTGGATTTTTCTTCCAATGATTTTGGTGGTACTATTGAGAATGGTTTAGGAGCATGTTCTAAGCTTGAGAGATTTAGGGCTGGTTTCAATGTTCTATCAGGGGATATACCAAATGATATTTATGATGCTGTTTCACTCATTGAAATATCATTGCCACTTAATAAGATTAATGGATCAATTGGTGATGGAGTTGTCAAACTTGTCAATCTCACTGTTTTGGAGCTTTATTCCAATCATTTGATAGGTCCTATTCCTAGGGATATTGGTAGACTTTCCAAGTTGGAAAAGTTACTTCTTCATGTCAATAATTTAACTGGTACAATTCCACCATCTTTGATGAATTGTAACAATCTTGTTGTGTTGAATTTGAGGGTGAATAATTTGGAAGGAAATCTATCTGCGTTCAATTTCTCGGGATTTGTAAGACTTGCTACCCTTGATCTTGGTAACAATAGGTTTAGCGGTGTTTTACCGCCGACCCTTTATGATTGTAAGTCACTTGCAGCATTAAGGCTTGCAACTAATCAACTTGAGGGACAGGTTTCATCTGAGATACTTGGACTCGAGTCTCTTTCGTTTCTATCGATTTCTAATAACAGGTTGAAGAATATCACTGGTGCTCTTAGAATACTCACTGGCCTTAAGAAGCTCAGTACCCTTATGCTCTCCAAGAATTTTTACAATGAAATGATACCACATGGTGTGAACATCATAGACCCTAACGGATTCCAAAGTATCCAAGTTTTAGGGTTAGGTGGTTGTAATTTCACCGGTCAGATACCAAGTTGGCTTGAAAATTTAAAGAAGCTTGAGGCCATAGACCTGTCTTTTAATCAATTCAGTGGTTCAATTCCTTCCTGGTTAGGTACACTTCCTCAGCTTTTCTACATAGACCTGTCAGTTAACCTACTTACAGGTCTGTTTCCGATCGAGCTCACAAAACTCCCGGCACTAGCATCACAACAAGCAAATGATAAAGTAGAAAGAACTTACTTGGAGTTACCTGTCTTTGCTAATGCCAACAATGTTTCTTTGTTGCAATACAATCAACTTTCAAGCCTTCCACCAGCAATTTACCTTGGAACCAATCACCTCAGTGGCAGCATCCCGATTGAGATTGGCCAACTGAAAGCTCTTCTTCAGCTGGACCTGAAGAAAAACAACTTCTCTGGCAATATACCCGATCAAATTTCAAACTTGGTTAACTTGGAGAAACTAGACCTCTCGGGAAACAACCTATCCGGTGAAATTCCTGTTTCACTCACTAGATTACATTTCTTGTCCTTTTTCAGTGTAGCACACAATAATCTTCAAGGACAGATACCAACTGGTGGTCAGTTTAATACTTTTTCCAACACCAGCTTTGAAGGAAACTCGCAATTGTGCGGTTTGCCTATTCAGCACCCTTGTTCTTCTCAACAAAATAATACTAGTACTTCAGTTAGTAGCAAACCCAGCAAAAAAATAATAGTAATACTTATTATTGCTGTCTCTTTCGGCATAGCTACCCTGATAACATTATTGACACTGTGGATACTCTCCAAGAGAAGGGTTAACCCCAGAGGAGATTCTGATAAGATTGAACTGGAATCAATTTCGCCATACTCAAACAGCGGCGTTCATCCTGAGGTTGATAAGGAGGCTAGCCTAGTGGTATTGTTTCCAAACAAAAATAATGAAACCAAGGATCTTTCCATATTAGAGATCATAAAAGCCACTGAACATTTCAGTCAGGCGAATATAATAGGTTGTGGCGGTTTTGGTTTGGTTTATAAAGCATCATTTCAAAATGGAACTAAGCTAGCCATCAAGAAACTTTCAGGAGATTTAGGCCTTATGGAAAGGGAATTTAAAGCAGAAGTAGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTATCATTGCAAGGTTACTGCGTGCACGACGGTTATCGGCTACTCATATATAATTACATGGAGAATGGAAGTCTCGATTACTGGCTGCACGAAAAGTCTGACGGTGCATCTCAACTCGATTGGCCGACTCGTTTGAAGATCGCACAAGGAGCAGGTTGTGGTTTGGCCTATTTGCATATGATATGTGATCCACACATCGTGCACCGTGATATAAAGTCAAGCAATATACTACTCAATGATAAGTTTGAAGCGCGTGTTGCTGATTTCGGGTTGTCGCGGTTGATTCTTCCGTATCAGACTCATGTTACAACGGAACTTGTAGGTACATTGGGTTACATTCCTCCGGAGTATGGGCAAGCATGGGTGGCTACTCTTAGAGGAGATGTGTACAGCTTTGGTGTTGTAATGCTTGAGCTTCTCACCGGAAGGAGACCTATGGATGTATGCAAGCCTAAAATTTCAAGGGAGTTGGTCAGTTGGGTTCAACAGATGAAAAACGAAGGAAAACAAGAACAAGTATTCGACTCAAATCTACGAGGGAAGGGATTTGAAGGAGAGATGCTGCAAGTACTTGATATAGCATGCATGTGTGTTAATATGAATCCTTTCAAGAGACCAACCATCAGAGAAGTTGTTGAATGGCTAAAGAATGTTCCCAGAAATAAAGACTAG 3267 0.3848 MRSTSNQPSNPSSKNYLFFSKLMSSFKKTTFFLTLFIVHVSSSCNQLDKDSLLSFSSNFSSFSPHLPPLNWSSSIDCCSWEGITCDQNNHHVTHLFLPSRGLTGFISFSLLTSLESLSHLNLSHNRFYGNLQNHFFDLLNHLLVLDLSYNHFSSELPTFVKPSNGTGTGNSSVIQELDLSSNSFNGTLPVSLIQYLEEGGNLISFNVSNNSFTGPIPISIFCVNQLNNSAIRFLDFSSNDFGGTIENGLGACSKLERFRAGFNVLSGDIPNDIYDAVSLIEISLPLNKINGSIGDGVVKLVNLTVLELYSNHLIGPIPRDIGRLSKLEKLLLHVNNLTGTIPPSLMNCNNLVVLNLRVNNLEGNLSAFNFSGFVRLATLDLGNNRFSGVLPPTLYDCKSLAALRLATNQLEGQVSSEILGLESLSFLSISNNRLKNITGALRILTGLKKLSTLMLSKNFYNEMIPHGVNIIDPNGFQSIQVLGLGGCNFTGQIPSWLENLKKLEAIDLSFNQFSGSIPSWLGTLPQLFYIDLSVNLLTGLFPIELTKLPALASQQANDKVERTYLELPVFANANNVSLLQYNQLSSLPPAIYLGTNHLSGSIPIEIGQLKALLQLDLKKNNFSGNIPDQISNLVNLEKLDLSGNNLSGEIPVSLTRLHFLSFFSVAHNNLQGQIPTGGQFNTFSNTSFEGNSQLCGLPIQHPCSSQQNNTSTSVSSKPSKKIIVILIIAVSFGIATLITLLTLWILSKRRVNPRGDSDKIELESISPYSNSGVHPEVDKEASLVVLFPNKNNETKDLSILEIIKATEHFSQANIIGCGGFGLVYKASFQNGTKLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVSLQGYCVHDGYRLLIYNYMENGSLDYWLHEKSDGASQLDWPTRLKIAQGAGCGLAYLHMICDPHIVHRDIKSSNILLNDKFEARVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPMDVCKPKISRELVSWVQQMKNEGKQEQVFDSNLRGKGFEGEMLQVLDIACMCVNMNPFKRPTIREVVEWLKNVPRNKD* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0713 1088 Gene3D Ribonuclease Inhibitor 277 367 IPR032675 -
Mtr8g0713 1088 SMART LRR_typ_2 300 324 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 139 161 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 373 397 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 421 443 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 633 657 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 114 138 IPR003591 -
Mtr8g0713 1088 SMART LRR_typ_2 500 524 IPR003591 -
Mtr8g0713 1088 ProSiteProfiles Protein kinase domain profile. 809 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0713 1088 Gene3D Transferase(Phosphotransferase) domain 1 885 1088 - -
Mtr8g0713 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Mtr8g0713 1088 Pfam Leucine Rich Repeat 635 654 IPR001611 GO:0005515
Mtr8g0713 1088 ProSiteProfiles Leucine-rich repeat profile. 635 658 IPR001611 GO:0005515
Mtr8g0713 1088 SMART serkin_6 809 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0713 1088 Gene3D Ribonuclease Inhibitor 199 276 IPR032675 -
Mtr8g0713 1088 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Mtr8g0713 1088 Pfam Protein tyrosine and serine/threonine kinase 812 1079 IPR001245 GO:0004672|GO:0006468
Mtr8g0713 1088 Gene3D Ribonuclease Inhibitor 45 198 IPR032675 -
Mtr8g0713 1088 PANTHER LEUCINE RICH REPEAT KINASE 2 24 1083 - -
Mtr8g0713 1088 PANTHER OS06G0692500 PROTEIN 24 1083 - -
Mtr8g0713 1088 Gene3D Ribonuclease Inhibitor 368 712 IPR032675 -
Mtr8g0713 1088 Gene3D Phosphorylase Kinase; domain 1 773 884 - -
Mtr8g0713 1088 Pfam Leucine rich repeat 478 537 IPR001611 GO:0005515
Mtr8g0713 1088 SUPERFAMILY Protein kinase-like (PK-like) 795 1080 IPR011009 -
Mtr8g0713 1088 SUPERFAMILY L domain-like 73 222 - -
Mtr8g0713 1088 SUPERFAMILY L domain-like 476 698 - -
Mtr8g0713 1088 ProSitePatterns Protein kinases ATP-binding region signature. 815 838 IPR017441 GO:0005524
Mtr8g0713 1088 SUPERFAMILY RNI-like 176 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0713 Mtr-Chr8 8580185 8584025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0713 1 709 Miscellaneous Gene Families AT1G17240 51.189 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr8g0713 PK_Tyr_Ser-Thr 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0713 - - gmx:100781943 1582.77