Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0699 ATGGGTGCAATTGCAGCTGCAACTGCAACAAATGGGTCAAGTGATGCATTAGGTGATTCTAATAGAATTGAAATTACAGGAAAAATCATGGTTTTAGCTATAATTTTTCTATTCATGGTTGTTATGTTTGTTCTAATGCTTCATTTATATGCAAAGTGGTTTTGGTGGCGTTTTGAGGAAAGAACTGTTCCTCAACCAAGAAACCGCCGTCGACGACGGCGGTTTGTTTTTGCTCCTGGTCAAGATCCTGTTGTGTATGGAAGTCACCAAATTGGACTTGAAGCTAAAATTCTTAAGTCTTTGCCTGTTTTGGTTTTCAAGAATGAGGATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTATGTGATGTTGTTGAAGGAGAAAAAACTAGGCTTTTACCAAAATGCAATCATGGGTTTCATTTAGATTGTATTGATATGTGGTTTCAATCTCATTCTACTTGTCCTCTTTGTAGGAATTTAGTTTCTGTTGAATCATGTAAACCAAATAGTACTACTTCAAATGGTGAAGAGATGAATGTGTTAGTGTCATCAGAAGGTGAAAATTTGAGTCATGTGAATGGTTTAGAGTCTTCAAATTTTCCTACAAATGTTTTGGTTTGGGGGAATTCTCAAAGACAAGTTAGTTCTTCTTTTGGTGTTTCTTTGGAAGAAGGAAGTTCTCATCAACAACCTTGTTCAACATCATCATCATCATCTACTTTAGGTAGTGATAATGGTAATAGTGGTAGATGTAATGGAAATGGAATGTTGGTGATTGATATACCATTACCAAGTGACTTTAGTTCTTCCTCATTGTCACCTTCTGATAATAGGTATGTTGAAGATGAAATGAAATCACCAATGGCATCAAGATTGAGGTCATTTAAGAGGCTTTTAAGTAGAGACAAAAAGTTTAGTCCTTCAACTCCAAGTTCTATGGATGTGGAACAAGGCCAGAGCTAG 966 0.3623 MGAIAAATATNGSSDALGDSNRIEITGKIMVLAIIFLFMVVMFVLMLHLYAKWFWWRFEERTVPQPRNRRRRRRFVFAPGQDPVVYGSHQIGLEAKILKSLPVLVFKNEDFKDGLECAVCLCDVVEGEKTRLLPKCNHGFHLDCIDMWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGENLSHVNGLESSNFPTNVLVWGNSQRQVSSSFGVSLEEGSSHQQPCSTSSSSSTLGSDNGNSGRCNGNGMLVIDIPLPSDFSSSSLSPSDNRYVEDEMKSPMASRLRSFKRLLSRDKKFSPSTPSSMDVEQGQS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0699 321 Pfam Ring finger domain 116 159 IPR001841 -
Mtr8g0699 321 MobiDBLite consensus disorder prediction 219 250 - -
Mtr8g0699 321 MobiDBLite consensus disorder prediction 266 321 - -
Mtr8g0699 321 SUPERFAMILY RING/U-box 97 164 - -
Mtr8g0699 321 MobiDBLite consensus disorder prediction 305 321 - -
Mtr8g0699 321 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 318 IPR044675 -
Mtr8g0699 321 SMART ring_2 117 158 IPR001841 -
Mtr8g0699 321 MobiDBLite consensus disorder prediction 279 304 - -
Mtr8g0699 321 CDD RING-H2_EL5_like 116 159 - -
Mtr8g0699 321 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Mtr8g0699 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 163 IPR013083 -
Mtr8g0699 321 PANTHER RING-H2 FINGER PROTEIN ATL3 12 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0699 Mtr-Chr8 8398774 8400515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0699 24 304 C3H Transcription Factor Family AT1G53820 45.545 1.37e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0699 - - cam:101491184 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0699 8 8398774 8400515 Mtr8g0699 8 8398774 8400515 ECH