Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0663 ATGGCTAACGAAGGAAACAAAAGCAATGATTTCTATGCAGTTTTGGGATTGAATAAGGAATGCTCTGATTCAGAGCTAAGGAATGCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGGAATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTATTCTGTTTTATCTGACTCGAACAAGAGATTAATGTACGACGTTGGAGTTTACGACAGTGATGATGACGAAAATGGTATGGGAGACTTTCTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGAGAGGAGAGCTTCGAGGAGTTACAACAGTTGTTTGATGATATGTTTCAAGCGGATATCGGATTAAATGGAAGCACCTCTCTTAATGCTTCGGGTTGCTCCACTTCATCGACTTTCATGACGTTCAGTGAAAGCTCGAATTCAAATAAGCGCAATTCCACTCAAATGAATTTTGGGAAGGCAGAGGATTCTTCTAGTTTTGGTGCAAATTACCAGAACTTCTGTTTTGGGATGAAGCACCTTCAAGAAGATGTGGAGAAGGAAAAAGGGGGAATTCTAGAAGGAGGAGGTAGCAAAAAACAAAGAAAAGGAAGAAAACAAAAAATTTCATGTGGACATGTTTCCTCTAATGACCATCCTGGTATTTCTGCTAATTGA 708 0.3884 MANEGNKSNDFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASGNVKFVEEAKKKFQAIQEAYSVLSDSNKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFDDMFQADIGLNGSTSLNASGCSTSSTFMTFSESSNSNKRNSTQMNFGKAEDSSSFGANYQNFCFGMKHLQEDVEKEKGGILEGGGSKKQRKGRKQKISCGHVSSNDHPGISAN* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0663 235 MobiDBLite consensus disorder prediction 197 235 - -
Mtr8g0663 235 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mtr8g0663 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Mtr8g0663 235 PANTHER PUTATIVE, EXPRESSED-RELATED 1 229 - -
Mtr8g0663 235 MobiDBLite consensus disorder prediction 220 235 - -
Mtr8g0663 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
Mtr8g0663 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Mtr8g0663 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mtr8g0663 235 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mtr8g0663 235 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 229 - -
Mtr8g0663 235 Gene3D DnaJ domain 7 137 IPR036869 -
Mtr8g0663 235 SUPERFAMILY Chaperone J-domain 7 93 IPR036869 -
Mtr8g0663 235 CDD DnaJ 10 70 IPR001623 -
Mtr8g0663 235 Pfam DnaJ domain 10 78 IPR001623 -
Mtr8g0663 235 MobiDBLite consensus disorder prediction 152 172 - -
Mtr8g0663 235 SMART dnaj_3 9 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0663 Mtr-Chr8 7870315 7874646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0663 12 78 C2H2 Transcription Factor Family AT1G74250 43.284 2.23e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0663 8 7870315 7874646 Mtr8g0663 8 7870315 7874646 ECH