Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0659 ATGGCTGATTCTTCCTTTGAGATAGACAATCCGAGAAGACACTATCCAACACCAGTGAGTTATCAAAGTATATCTGGCTCTAGCTCCTTCATAAATTCTGCTTCTCGAAGCAACGCAACTCCGAGAACGAGAAGAACTCGTCGCAACAGAATTCCATCCACACCGTTTGCCTCAGATGACGACCGTTCATGGCAGGGTGAAGTTTCGTGGAAGTTTGAGCCAACCGGGTTGCGTGAACATAGCACAAACTTTGGTTCTGTTCTTAGTCCATGGCCAACAAACTCCACCTCTGATCGTAGCCGCGTGTTTCGCCAATCGGCTAATGACTATTACCTTTCGAGAATAGGCGGTTTTCGAAACCTAACAAACTCATCAAATGATCATTCTTCCTATGGAAGAGTTGAACTTAAAAGCCATGTTGCTAGGGCCACCAATGATCATAGTTATTTTGATCAATATAGTGGATTCTCCAAATTGGGAATCATCAAAGAAGGAGTTAACAGTGGAAATCGTCACATTAATAAAAAGGCTAGTCCATTAGCCGAGGAAGACGAGCTAAGTGGGATCGATTATAGTATATCAGATGAACATGTTAAACATGATCATGGTCATGGAGTACCATCATATGGTAGAAAATCCCCTAGCCAAATTTATGGTGGTGGTGGTGGTTATAGTCACTATGAGAGTAAAATGGCATCAGGATATGATGATGATGAAGGTGATGAGGATATGGACGAGGATGATGTTGTTGGTCCTCCAAAGAATGTTGGATTGTTTAGCTTGTTTAGGTATACAAGAAATTGGGATTGGTTACTTGTGTTTATTGGTTGTATAGGAGCTCTAATAAATGGAGGATCACTTCCTTGGTATTCCTATCTTTTTGGAAACTTGGTTAACAAGCTTTCAAGAGAAGCAAAAAATGACAAAGATCAGATGTTGAAGGATGTAGAGCAGATATGTATATTTATGACTGGCTTAGCTGCAGTTGTGGTAGTTGGAGCATATATGGAGATCACATGTTGGAGGTTAGTGGGGGAGAGATCTGCACAAAGAATCAGAACTGAATATCTAAGAGCAATTCTTAGACAAGACATAAGTTTTTTTGATACAGATATCAATACAGGTGATATTATGCATGGAATTGCTAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGAGAAGATGGCTCACTTCATTCATCATGTATTTACATTCATATGTGGATATGCAGTTGGGTTTAGAAGATCATGGAAAGTTTCATTGGTTGTATTCTCAGTCACACCATTAACAATGTTCTGTGGCATGGCTTACAAAGCACTTTATGGTGGTCTAACAGCTAAAGAGGAAGCTTCTTATAGAAAAGCTGGTAGCATTGCAGAGCAGGCCATAAGTTCAATTAGGACAGTGTTTTCTTTTGTAGCTGAAAGTCAATTGGGTGAAAAATATTCAGAGCTACTTCAAAAATCAGCTCCAATTGGAGCTAAAATTGGTTTTGCAAAAGGTGCAGGAATGGGTGTTATCTACTTAGTAACATATTCAACATGGGCTTTGGCTTTTTGGTATGGCTCTATCTTAATTGCTAGGGGTGAACTTGATGGTGGTTCAGCTATTGCTTGTTTCTTCGGTGTCAATGTTGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCACAATTTGCGCAAGGTACTGTTGCAGCAAGCCGTGTATTCTACATTATAGAGAGAATTCCTGAGATTGATCCCTACAATCCTGAGGGAAGGAAGCTCTCATCTGTTCGTGGAAGGATTGAACTAAAGAATGTTATTTTTGCATATCCATCTCGTCCTGATTCACTTATACTTAATTCAATTAACTTGGTTTTTCCATCTTCAAAAACCTTGGCATTGGTTGGTGCAAGTGGAGGTGGAAAATCAACTATCTTTGCTCTCATTGAGAGGTTCTATGACCCTATAGAAGGGATTATTACCTTGGATGGTCATGATTTGAGGACACTGCAAGTAAAGTGGTTAAGGGATCAAATTGGGATGGTTGGTCAAGAGCCAATTCTTTTTGCTACATCCATACTTGAAAATGTGATGATGGGGAAAGATAATGCCACAAAGGAAGAGGCAATTTCTGCTTGCATTGCTGCTGATGCTCACAATTTCATCTCTAAGCTGCCACTTCGTTACGACACTCAGGTTGGTGATAGAGGTACAAAACTTTCAGGAGGTCAAAAGCAAAGAATTGCATTGGCTAGAGCAATGATAAAAAATCCTAAAATCCTTCTTTTAGATGAACCTACCAGTGCTCTTGATGCCGAGTCAGAAGCTGCAGTTCAAAGGGCCATTGACAAGATTTCAGCAGGAAGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTGAAGAATGCTGATTCCATTGTAGTTCTTGAACATGGTTCTGTCACCGAGATTGGCGACCATCGCCAGCTTATGTCGAAAGCTGGAACCTACTTCAACCTTGTCAAACTTGCAACTGAATCCATTTCAAAACCTCTTCCTACAGAAAATAACATGCAAATAACCAAAGATTTATCATCCATCAATAATAAATATGCTCCTGATATAGCAAAGTCAAGTTATCTAGTCGATATCTCGCGCTCTAAATTGGAAGATTCAATGCAGGATGAGAATCAAGAAGATATTGAAGATAAAAAATATAAAAAGTCAAGAAATTACAAACTTTCTGAGGTATGGAAATTGCAAAAGCCGGAGTTTATGATGCTAATTTCAGGCCTAGTTATGGGAATGTTTGCCGGCGCTTGTCTTTCCCTTTTTCCATTGGTTTTAGGCATATCCCTTGGAGTATATTTTAGCGACGACACTTCAAAAATGAAAAGAGATGTAGGGTACCTTTGTTTAGTACTTGTCGGCCTTGGATTCGGTTGCATACTCTCCATGACAGGACAACAAGGTTTATGTGGTTGGGCAGGTTCAAAGCTAACACTGAGAGTTAGGAACCTCTTGTTTCAATCCATACTTAGACAAGAACCTGGATGGTTTGATTTTGATGAAAACTCAACCGGTGTATTGGTGTCAAAACTTTCGATAGATGCGGTTAGTTTTCGTTCGGTACTCGGTGACAGATTCTCGGTACTTCTTATGGGATTGAGTTCGGCCGCAGTTGGACTTGGTGTGTCTTTTGTATTTAATTGGGAACTAACACTTGTTGCAGCTGCTGTAACTCCTTTAACCCTTGGTGCAAGTTACATAAACTTGATCATAAACATCGGTCCGAAAATCAATAACAACTCTTATGCAAGAGCAAGCAATATTGCCTCGGGTGCAGTTTCAAATATAAGGACAGTTGCTACATTTTCTGCTCAGGAACAGATAGTTAACGCCTTTGATAAAGCCTTATCAGAACCTAGGAAAAAATCATTAAAAAGTTCACAGCTTCAAGGTCTTGTATTTGGATTGTTTCAAGGTGCTATGTATGCAGCATACACCTTAACTCTTTGGTTTGGTGCTTACCTTGTAAAAAATAACCGAGGAGATTTTGACGATGTTTATAAGATTTTTCTCATTCTTGTTTTGAGTTCATTTTCTGTTGGACAACTAGCTGGTTTAGCACCTGATACATCTATGGCTGCTAGCTCAATTCCTGCAGTTCAAGATGTTATAAACAGAAAACCATTGATAGGAAATGATGGAAGAAAAACTAAAAAAGTTGATAGATCAAAGGCTTTCAAAATAGAATTCAAAATGGTGACATTTGCATATCCATCAAGGCCTGAGGTAACTGTGCTGAGGAATTTCTGTTTAAAGGTCCAAGGTGGAAGTACAGTGGCTCTGGTGGGACCAAGTGGATCAGGAAAATCAACAGTTGTGTGGTTGACTCAGAGATTCTATGATCCTGATCAAGGAAAGGTTATGATGAGTGGTGTGGATTTGAGGGAGATTGATGTGAAATGGTTGAGGAGACAAATTGCTTTGGTTGGTCAAGAACCTGCACTTTTTGCTGGGAGTATAAGGGAGAATATTGCATTTGGGGACCAAAGTGCTTCATGGGCTGAAATTGAAGCTGCTGCAATGGAAGCTTACATTCATAAGTTCATCAGTGGACTTCCTCAAGGTTATGAAACACAGGTTGGTGAAAGTGGAGTCCAATTATCAGGTGGACAAAAACAAAGAATTGCTATAGCAAGGGCAATATTGAAGAAATCAAAGGTGCTTTTACTTGATGAAGCAAGCAGTGCATTAGACTTGGAATCAGAAAAACACATCCAAGAAGCTCTTAAGAATGTTTCCAAAGAGGCAACAACCATAATAGTTGCACACCGTCTTTCTACAATCAGAGAAGCCGATAAAATTGCAGTTATGAGAAATGGAGAAGTAGTTGAGTATGGTAGCCATGACACTCTCATTTCTTCCATTCAAAATGGTTTGTATGCTAGCCTTGTCAGAGCTGAGACTGAAGCTAATGCATTTTCTTAA 4467 0.3967 MADSSFEIDNPRRHYPTPVSYQSISGSSSFINSASRSNATPRTRRTRRNRIPSTPFASDDDRSWQGEVSWKFEPTGLREHSTNFGSVLSPWPTNSTSDRSRVFRQSANDYYLSRIGGFRNLTNSSNDHSSYGRVELKSHVARATNDHSYFDQYSGFSKLGIIKEGVNSGNRHINKKASPLAEEDELSGIDYSISDEHVKHDHGHGVPSYGRKSPSQIYGGGGGYSHYESKMASGYDDDEGDEDMDEDDVVGPPKNVGLFSLFRYTRNWDWLLVFIGCIGALINGGSLPWYSYLFGNLVNKLSREAKNDKDQMLKDVEQICIFMTGLAAVVVVGAYMEITCWRLVGERSAQRIRTEYLRAILRQDISFFDTDINTGDIMHGIASDVAQIQEVMGEKMAHFIHHVFTFICGYAVGFRRSWKVSLVVFSVTPLTMFCGMAYKALYGGLTAKEEASYRKAGSIAEQAISSIRTVFSFVAESQLGEKYSELLQKSAPIGAKIGFAKGAGMGVIYLVTYSTWALAFWYGSILIARGELDGGSAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFYIIERIPEIDPYNPEGRKLSSVRGRIELKNVIFAYPSRPDSLILNSINLVFPSSKTLALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATSILENVMMGKDNATKEEAISACIAADAHNFISKLPLRYDTQVGDRGTKLSGGQKQRIALARAMIKNPKILLLDEPTSALDAESEAAVQRAIDKISAGRTTIVIAHRIATVKNADSIVVLEHGSVTEIGDHRQLMSKAGTYFNLVKLATESISKPLPTENNMQITKDLSSINNKYAPDIAKSSYLVDISRSKLEDSMQDENQEDIEDKKYKKSRNYKLSEVWKLQKPEFMMLISGLVMGMFAGACLSLFPLVLGISLGVYFSDDTSKMKRDVGYLCLVLVGLGFGCILSMTGQQGLCGWAGSKLTLRVRNLLFQSILRQEPGWFDFDENSTGVLVSKLSIDAVSFRSVLGDRFSVLLMGLSSAAVGLGVSFVFNWELTLVAAAVTPLTLGASYINLIINIGPKINNNSYARASNIASGAVSNIRTVATFSAQEQIVNAFDKALSEPRKKSLKSSQLQGLVFGLFQGAMYAAYTLTLWFGAYLVKNNRGDFDDVYKIFLILVLSSFSVGQLAGLAPDTSMAASSIPAVQDVINRKPLIGNDGRKTKKVDRSKAFKIEFKMVTFAYPSRPEVTVLRNFCLKVQGGSTVALVGPSGSGKSTVVWLTQRFYDPDQGKVMMSGVDLREIDVKWLRRQIALVGQEPALFAGSIRENIAFGDQSASWAEIEAAAMEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSKVLLLDEASSALDLESEKHIQEALKNVSKEATTIIVAHRLSTIREADKIAVMRNGEVVEYGSHDTLISSIQNGLYASLVRAETEANAFS* 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0659 1488 Gene3D ABC transporter type 1, transmembrane domain 321 1210 IPR036640 GO:0005524|GO:0016021
Mtr8g0659 1488 MobiDBLite consensus disorder prediction 1 62 - -
Mtr8g0659 1488 Gene3D - 596 861 IPR027417 -
Mtr8g0659 1488 ProSitePatterns ABC transporters family signature. 737 751 IPR017871 GO:0005524
Mtr8g0659 1488 CDD ABC_MTABC3_MDL1_MDL2 1242 1480 - -
Mtr8g0659 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 598 834 IPR003439 GO:0005524
Mtr8g0659 1488 PANTHER - 235 1487 - -
Mtr8g0659 1488 Gene3D - 1234 1487 IPR027417 -
Mtr8g0659 1488 Pfam ABC transporter transmembrane region 273 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0659 1488 Pfam ABC transporter transmembrane region 920 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0659 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1478 IPR003439 GO:0005524
Mtr8g0659 1488 SUPERFAMILY ABC transporter transmembrane region 908 1222 IPR036640 GO:0005524|GO:0016021
Mtr8g0659 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 834 IPR027417 -
Mtr8g0659 1488 MobiDBLite consensus disorder prediction 16 40 - -
Mtr8g0659 1488 CDD ABC_6TM_Pgp_ABCB1_D1_like 274 571 - -
Mtr8g0659 1488 CDD ABC_MTABC3_MDL1_MDL2 598 835 - -
Mtr8g0659 1488 ProSitePatterns ABC transporters family signature. 1381 1395 IPR017871 GO:0005524
Mtr8g0659 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 274 563 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0659 1488 CDD ABC_6TM_Pgp_ABCB1_D2_like 909 1224 - -
Mtr8g0659 1488 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0659 1488 PANTHER ABC TRANSPORTER B FAMILY 235 1487 - -
Mtr8g0659 1488 SMART AAA_5 625 826 IPR003593 -
Mtr8g0659 1488 SMART AAA_5 1269 1455 IPR003593 -
Mtr8g0659 1488 SUPERFAMILY ABC transporter transmembrane region 260 583 IPR036640 GO:0005524|GO:0016021
Mtr8g0659 1488 Pfam ABC transporter 616 765 IPR003439 GO:0005524
Mtr8g0659 1488 Pfam ABC transporter 1260 1408 IPR003439 GO:0005524
Mtr8g0659 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1479 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0659 Mtr-Chr8 7826691 7834454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0659 892 1485 Calmodulin-binding Proteins AT2G36910 36.728 1.84e-107 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0659 K05658 - gmx:100816700 2232.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0659 8 7826691 7834454 Mtr8g0659 8 7826691 7834454 ECH