Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0647 ATGGCAAATTTAACTAATACTGTGTCAGATGGCCGGAGACTCACCTGTAAGGCACCGGAGAAGTTCAAATTTTCACAGACTTGTAGTCTTTTGAGTCAGTTCTTGAAAGAAAAGAGAATTTCTGGTGATGCTACACCTAGTTTCTTTGGGAAAATGGAGCCTAAAGCAAGTACAAAGGATTTGTTAGCCAACATGCAAAACTCAGATGGGGGTTTGAGACTAAATGCATCTGCTATTGAATCTCTTCCTCAGCTTGTGGAAAATCCTTGCATTAAGAAGTCTAATACAAGATCAACAGATCCTAAAACTCCACAATTGACGATATTCTATTCCGGGAAAATGTTAGTATTTGACGCTTTTTCACCTTCGAATGCAACCGAGATCATGGAGTTGGCCACCAAATTAGCCTCTGAAAATCCAAGCACCGAAGAAAACCCCCCAAGTGCACCAGTCACTACTGAAAAATTAAAGGAGTCCGAAATTCCTCAAACAAACACTGCCTTAGAAACAACCGAACAAGGAAACCAAGCCAAATGTTCAGATATGAGATATCCAAGAAGAGCTTCACTTCTTAAATTCCTTGAGAAAAGAAAAGAAAGGGTCATTGCTAGAGGACCTTATCAAATTAATGGTCACAAAAATGAGGGTAGTAGTTCTGGAAGTGAACCTAAAGATCATTCTTCCGATCAATTCGACCTTAACTTATAG 708 0.3941 MANLTNTVSDGRRLTCKAPEKFKFSQTCSLLSQFLKEKRISGDATPSFFGKMEPKASTKDLLANMQNSDGGLRLNASAIESLPQLVENPCIKKSNTRSTDPKTPQLTIFYSGKMLVFDAFSPSNATEIMELATKLASENPSTEENPPSAPVTTEKLKESEIPQTNTALETTEQGNQAKCSDMRYPRRASLLKFLEKRKERVIARGPYQINGHKNEGSSSGSEPKDHSSDQFDLNL* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0647 235 SMART tify_2 99 134 IPR010399 -
Mtr8g0647 235 MobiDBLite consensus disorder prediction 135 149 - -
Mtr8g0647 235 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Mtr8g0647 235 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 9 227 - -
Mtr8g0647 235 Pfam Jas motif 186 208 IPR018467 -
Mtr8g0647 235 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 227 IPR040390 -
Mtr8g0647 235 MobiDBLite consensus disorder prediction 157 178 - -
Mtr8g0647 235 Pfam tify domain 101 132 IPR010399 -
Mtr8g0647 235 MobiDBLite consensus disorder prediction 135 183 - -
Mtr8g0647 235 MobiDBLite consensus disorder prediction 202 235 - -
Mtr8g0647 235 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0647 Mtr-Chr8 7635981 7638649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0647 15 200 Tify Gene Family AT1G72450 32.212 8.54e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr8g0647 tify 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0647 K13464 - gmx:100815478 323.553