Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0646 ATGGCCATAGCAGCTCCTGCAATTTTCCATCCATCATTCTTCATCTTGATCTTCAATATCATCATAAATTTTTCTATGATATATTCCTTGTCAGAAACAGAAGCTTTATTAAATCTAAAAAACTCATTCTCAAATGCTAATGCTCTAAATAGTTGGTTTGCCAACACTTTACCTTGTACCGAAGACGATCAATGGGAAGGCGTTGTTTGTTACAACGGTCTTGTAACCGGTCTGCGCCTTGAAGGAATGGGATTATTCGGCAAAATTGATGTTGATGCATTGCTTGAACTTAAGGGTTTAAGAACTATTAGTTTCATGAACAATTCTTTCACTGGTTCGATACCAGAATTGAATCGAATCGGTTTCTTGAAAGCGATGTTTTTGTCGGGAAATAAATTTTCAGGACATATTCCTAAGGAATATTTTCAAAGAATGAAATCATTGAAGAAAGTTTGGTTATCTAATAATGAATTTACAGGTGATATTCCATCATCATTGGCTGAGATTCCTCAACTTGTTGAATTACATCTTGAAAAAAATCAGTTTAGTGGTAATATTCCAAATTTGAATAATCCTTCATTGATGATTTTTGATGTTTCAAATAATAATTTGGAAGGTGAAGTTCCTCAAGGTTTGTTGAGATTCAATGGAAATTCTTTTTTAGGAAATTCTGGTTTATGTGGCGAAAAAATGGGCAAAATATGTGGACAACAACCAGTGCAACAAACAAATCCTATTCCTATTGATGCAAATAATATTAGTAATACATCAGTTACCAACAATACAGTGCAACAAACAAATCCTATTCCAAGTAATGTTATTGTGACTGTGCCTGATAACAGTAAGCATAAGTCATTGCAGATTATTGAAAATATTAATGACAGTGGTAGTTTTGAAGTTCAAGTAAGTAGTAGTAATAGTATTACTAGTAGTACTAATCAAGAGAAAAGAGATATGAATTTTATGAAAAAATCATGTAGTAAAAGAGGTTCATCTAAGGGTAGTCAAGGGATTGGTGAGCTTGTGATGATGAATAATGAGAAGGGTGTGTTTGGTTTACCTGATTTGATGAAAGCTTCTGCTGAAGTTCTTGGAAATGGAGGGTTTGGATCATCTTATAAAGCTGTGATGGCTAATGGTGTTGCTGTGGTTGTGAAAAGAACTAGAGAATTGAATGCTTTGGGAAAAGATGGTTTTGATGCTGAGATGAAAAAGCTTGGAAGGTTAAAACATTGGAATGTTTTGACACCTTTAGCTTATCATTACAGAAAAGATGAGAAATTAGTTATCTCTGAGTATGTTCCTAGAGGAAGTCTACTCTACTTGCTGCATGGTGATAGAGGACCATCACATGCAGAACTAGATTGGAACACACGTTTAAAGATAGTACAAGGAATTGCAAAAGGAATGCATTATCTTCACACAGAATATCCTTCATCTGATCTACCACATGGAAACTTAAAATCAAGCAATGTTTTACTTGGACCAGATTATGAACCATTACTCATAGATTATGGTTTCATCCATCTAGTTAACCCTTCAAGTTTTACAAATACATTACTTGCTTTTAAAGCACCAGAAGCATTACAACACAACCAAATTTCGCCTCGTTGTGACGTATACTGTCTCGGTGTAGTCATACTCGAAATACTAACCGGAAAATTTCCTTCTCAATATCTTAGCAACGGTAAAGGCGGAACCGATGTAGTACAATGGGTAGCATCAGCAATTTCTGAAGGAAGAGAAGTTGAACTACTTGATCCTGAAATTGCAAGTAATAAAAATCCATTAAGTGAAATGAAACAACTTGTTCATATTGGTGCTGCTTGTACTGAAAGTAATCCTCAAAACAGATTAGATATGATGGAAGCGGTTAGAAGAATAGAAGAGATTAAAACAAATGGTGTTGATCAAGTTCAAGAATTAAGAACAATAGAGGTTTTACCTGGTTTTGTTGATTCTTCTCAAGCATGTGATAATCAAGGGCATGTTGTTGATCAATCAAATAAGAGACATGGAACAAGTAGTTTTGGTAGTAAGGATAATTTTGAATTTGGCATCTCCTAA 2067 0.344 MAIAAPAIFHPSFFILIFNIIINFSMIYSLSETEALLNLKNSFSNANALNSWFANTLPCTEDDQWEGVVCYNGLVTGLRLEGMGLFGKIDVDALLELKGLRTISFMNNSFTGSIPELNRIGFLKAMFLSGNKFSGHIPKEYFQRMKSLKKVWLSNNEFTGDIPSSLAEIPQLVELHLEKNQFSGNIPNLNNPSLMIFDVSNNNLEGEVPQGLLRFNGNSFLGNSGLCGEKMGKICGQQPVQQTNPIPIDANNISNTSVTNNTVQQTNPIPSNVIVTVPDNSKHKSLQIIENINDSGSFEVQVSSSNSITSSTNQEKRDMNFMKKSCSKRGSSKGSQGIGELVMMNNEKGVFGLPDLMKASAEVLGNGGFGSSYKAVMANGVAVVVKRTRELNALGKDGFDAEMKKLGRLKHWNVLTPLAYHYRKDEKLVISEYVPRGSLLYLLHGDRGPSHAELDWNTRLKIVQGIAKGMHYLHTEYPSSDLPHGNLKSSNVLLGPDYEPLLIDYGFIHLVNPSSFTNTLLAFKAPEALQHNQISPRCDVYCLGVVILEILTGKFPSQYLSNGKGGTDVVQWVASAISEGREVELLDPEIASNKNPLSEMKQLVHIGAACTESNPQNRLDMMEAVRRIEEIKTNGVDQVQELRTIEVLPGFVDSSQACDNQGHVVDQSNKRHGTSSFGSKDNFEFGIS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0646 688 Gene3D Transferase(Phosphotransferase) domain 1 434 647 - -
Mtr8g0646 688 SUPERFAMILY Protein kinase-like (PK-like) 362 629 IPR011009 -
Mtr8g0646 688 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 636 - -
Mtr8g0646 688 Gene3D Ribonuclease Inhibitor 26 118 IPR032675 -
Mtr8g0646 688 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Mtr8g0646 688 ProSiteProfiles Protein kinase domain profile. 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0646 688 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mtr8g0646 688 Gene3D Ribonuclease Inhibitor 119 236 IPR032675 -
Mtr8g0646 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 636 - -
Mtr8g0646 688 SUPERFAMILY L domain-like 58 214 - -
Mtr8g0646 688 Pfam Protein kinase domain 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0646 688 Gene3D Phosphorylase Kinase; domain 1 325 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0646 Mtr-Chr8 7614463 7616736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0646 20 631 Receptor kinase-like Gene Family AT3G42880 46.761 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr8g0646 Pkinase 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0646 - - mtr:MTR_8g021350 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0646 8 7614463 7616736 Mtr8g0646 8 7614463 7616736 ECH