Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0623 ATGCCTTCAAAGAAAATTCAATGGAAATCATTTGTACTTGGTTGTTTCAAGGACAAAAACCCTTCATTGGAAACACCAAAATTTGTTTCAAAAAAGACAGGTTCATGTAGAATTTCTCTATCTGATTTAAGTGATTATTCATCACCTTCTGTCATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCATATTTTCACTTGCAAGGAACTCAAAGAGATCACAAACAACTTTGACAAATCAAATTTTCTTGGAGAAGGTGGATTTGGAAAGGTGTATAAAGGTTTTATTGATGATAAACTTAGGCCTACACTTGTTCCTCAAGCTGTGGCTGTTAAGGCCTTAAACTTGGATGGAAAACAAGGTCATAGAGAGTGGTTGGCTGAAGTTATCTTTTTGGGGCAATTGAAGCATCGCAATCTTGTTAACTTAATAGGCTACTGCTATGAAGATGAACATAGACTTCTTGTGTATGAATACATGGAAAGAGGAAGTCTTGAAGAAAAGCTTTTCAAAGGTTATTTAGCAACTTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGACTAGCTTTTCTTCATGAAGAGGAGAAACCAGTTATATATAGAGATGTTAAAGCCTCAAACATTCTATTGGATGCTGATTACAATGCTAAGTTGTCAGATTTTGGTTTAGCAATAGATGGACCAGATAAAGATCAAACACATATTACAACTCGTGTGATGGGTACACATGGATATGCTGCTCCTGAATATATCAATACAGGTCGTTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTAGAGCTACTAACAGGAAAGAAATCAGTGGACAAAAAAAGAACTCCAAGAGAGCAAGATTTAGTAGAATGGGCAAGGCCATCATTGAAGGATTCACACAGACTTGAAAGAATAATTGATTCAAGACTAGAAGATCAATACTCAATTGAAGGTGCTAGAAAATTAGCAATGTTGACTTATCAATGTTTAAGTCATCATGATAAAAGTAGACCAACAATGAGAACAGTTGTTAAGACCTTAGAGCATGTCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTAGCTCCTATTGAGGTAACAAATATTGAAGTGTCACTAAATGTGGATAAAAAAGGAAATGAAAATGAACGTGATGAGAATGAGATCAACAAAAGGGTTGTGAAAAGTAAAGATGAAGAAAAGGGAGAGAAAAATGAAAAGGGTCATCAAAGTCAACGTAAAAGTCGTAGCGATCGACGACGTGTTAAACCATTGATGAAGTCTCGTTCTGTTCACTCTGATACTGCTTTGTACAAGACTCTTGGAACTAGTTTATACTCACCCAAACAAAGCGAGGATAAGCAACAAGAAGTGAACATTTGCCAATATTAG 1428 0.3522 MPSKKIQWKSFVLGCFKDKNPSLETPKFVSKKTGSCRISLSDLSDYSSPSVMSDLSNSLVGSNLHIFTCKELKEITNNFDKSNFLGEGGFGKVYKGFIDDKLRPTLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCYEDEHRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTHGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRTPREQDLVEWARPSLKDSHRLERIIDSRLEDQYSIEGARKLAMLTYQCLSHHDKSRPTMRTVVKTLEHVMKLNDIPIGHFVYVAPIEVTNIEVSLNVDKKGNENERDENEINKRVVKSKDEEKGEKNEKGHQSQRKSRSDRRRVKPLMKSRSVHSDTALYKTLGTSLYSPKQSEDKQQEVNICQY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0623 475 MobiDBLite consensus disorder prediction 391 425 - -
Mtr8g0623 475 CDD STKc_IRAK 85 357 - -
Mtr8g0623 475 MobiDBLite consensus disorder prediction 391 475 - -
Mtr8g0623 475 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Mtr8g0623 475 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Mtr8g0623 475 MobiDBLite consensus disorder prediction 445 475 - -
Mtr8g0623 475 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Mtr8g0623 475 SUPERFAMILY Protein kinase-like (PK-like) 52 357 IPR011009 -
Mtr8g0623 475 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Mtr8g0623 475 SMART serkin_6 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0623 475 ProSiteProfiles Protein kinase domain profile. 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0623 475 PANTHER BNAA02G16030D PROTEIN 28 420 - -
Mtr8g0623 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Mtr8g0623 475 PANTHER OS01G0588500 PROTEIN-RELATED 28 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0623 Mtr-Chr8 7349363 7351954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0623 65 409 Glycoside Hydrolase AT3G07070 46.264 1.86e-93 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr8g0623 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0623 - - gmx:100790454 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1636 2 18426731 18430318 Mtr8g0623 8 7349363 7351954 ECH
Mtr8g0623 8 7349363 7351954 Mtr8g0623 8 7349363 7351954 ECH
Mtr8g0623 8 7349363 7351954 Mtr3g3818 3 52005685 52008143 ECH
Mtr8g0623 8 7349363 7351954 Mtr1g0329 1 3738720 3741819 ECH