Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr8g0623 | ATGCCTTCAAAGAAAATTCAATGGAAATCATTTGTACTTGGTTGTTTCAAGGACAAAAACCCTTCATTGGAAACACCAAAATTTGTTTCAAAAAAGACAGGTTCATGTAGAATTTCTCTATCTGATTTAAGTGATTATTCATCACCTTCTGTCATGAGTGATTTATCCAATTCATTAGTGGGATCAAATCTTCATATTTTCACTTGCAAGGAACTCAAAGAGATCACAAACAACTTTGACAAATCAAATTTTCTTGGAGAAGGTGGATTTGGAAAGGTGTATAAAGGTTTTATTGATGATAAACTTAGGCCTACACTTGTTCCTCAAGCTGTGGCTGTTAAGGCCTTAAACTTGGATGGAAAACAAGGTCATAGAGAGTGGTTGGCTGAAGTTATCTTTTTGGGGCAATTGAAGCATCGCAATCTTGTTAACTTAATAGGCTACTGCTATGAAGATGAACATAGACTTCTTGTGTATGAATACATGGAAAGAGGAAGTCTTGAAGAAAAGCTTTTCAAAGGTTATTTAGCAACTTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCTAAAGGACTAGCTTTTCTTCATGAAGAGGAGAAACCAGTTATATATAGAGATGTTAAAGCCTCAAACATTCTATTGGATGCTGATTACAATGCTAAGTTGTCAGATTTTGGTTTAGCAATAGATGGACCAGATAAAGATCAAACACATATTACAACTCGTGTGATGGGTACACATGGATATGCTGCTCCTGAATATATCAATACAGGTCGTTTGACAACAATGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTAGAGCTACTAACAGGAAAGAAATCAGTGGACAAAAAAAGAACTCCAAGAGAGCAAGATTTAGTAGAATGGGCAAGGCCATCATTGAAGGATTCACACAGACTTGAAAGAATAATTGATTCAAGACTAGAAGATCAATACTCAATTGAAGGTGCTAGAAAATTAGCAATGTTGACTTATCAATGTTTAAGTCATCATGATAAAAGTAGACCAACAATGAGAACAGTTGTTAAGACCTTAGAGCATGTCATGAAATTAAATGACATTCCAATTGGTCATTTTGTTTATGTAGCTCCTATTGAGGTAACAAATATTGAAGTGTCACTAAATGTGGATAAAAAAGGAAATGAAAATGAACGTGATGAGAATGAGATCAACAAAAGGGTTGTGAAAAGTAAAGATGAAGAAAAGGGAGAGAAAAATGAAAAGGGTCATCAAAGTCAACGTAAAAGTCGTAGCGATCGACGACGTGTTAAACCATTGATGAAGTCTCGTTCTGTTCACTCTGATACTGCTTTGTACAAGACTCTTGGAACTAGTTTATACTCACCCAAACAAAGCGAGGATAAGCAACAAGAAGTGAACATTTGCCAATATTAG | 1428 | 0.3522 | MPSKKIQWKSFVLGCFKDKNPSLETPKFVSKKTGSCRISLSDLSDYSSPSVMSDLSNSLVGSNLHIFTCKELKEITNNFDKSNFLGEGGFGKVYKGFIDDKLRPTLVPQAVAVKALNLDGKQGHREWLAEVIFLGQLKHRNLVNLIGYCYEDEHRLLVYEYMERGSLEEKLFKGYLATLPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDKDQTHITTRVMGTHGYAAPEYINTGRLTTMSDVYSFGVVLLELLTGKKSVDKKRTPREQDLVEWARPSLKDSHRLERIIDSRLEDQYSIEGARKLAMLTYQCLSHHDKSRPTMRTVVKTLEHVMKLNDIPIGHFVYVAPIEVTNIEVSLNVDKKGNENERDENEINKRVVKSKDEEKGEKNEKGHQSQRKSRSDRRRVKPLMKSRSVHSDTALYKTLGTSLYSPKQSEDKQQEVNICQY* | 476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr8g0623 | 475 | MobiDBLite | consensus disorder prediction | 391 | 425 | - | - | |
Mtr8g0623 | 475 | CDD | STKc_IRAK | 85 | 357 | - | - | |
Mtr8g0623 | 475 | MobiDBLite | consensus disorder prediction | 391 | 475 | - | - | |
Mtr8g0623 | 475 | ProSitePatterns | Protein kinases ATP-binding region signature. | 85 | 114 | IPR017441 | GO:0005524 | |
Mtr8g0623 | 475 | Gene3D | Transferase(Phosphotransferase) domain 1 | 162 | 366 | - | - | |
Mtr8g0623 | 475 | MobiDBLite | consensus disorder prediction | 445 | 475 | - | - | |
Mtr8g0623 | 475 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 161 | - | - | |
Mtr8g0623 | 475 | SUPERFAMILY | Protein kinase-like (PK-like) | 52 | 357 | IPR011009 | - | |
Mtr8g0623 | 475 | Pfam | Protein tyrosine and serine/threonine kinase | 83 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Mtr8g0623 | 475 | SMART | serkin_6 | 79 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr8g0623 | 475 | ProSiteProfiles | Protein kinase domain profile. | 79 | 361 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr8g0623 | 475 | PANTHER | BNAA02G16030D PROTEIN | 28 | 420 | - | - | |
Mtr8g0623 | 475 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Mtr8g0623 | 475 | PANTHER | OS01G0588500 PROTEIN-RELATED | 28 | 420 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr8g0623 | Mtr-Chr8 | 7349363 | 7351954 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr8g0623 | 65 | 409 | Glycoside Hydrolase | AT3G07070 | 46.264 | 1.86e-93 | 287 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Mtr8g0623 | PK_Tyr_Ser-Thr | 6.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr8g0623 | - | - | gmx:100790454 | 687.182 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mtr2g1636 | 2 | 18426731 | 18430318 | Mtr8g0623 | 8 | 7349363 | 7351954 | ECH | |
Mtr8g0623 | 8 | 7349363 | 7351954 | Mtr8g0623 | 8 | 7349363 | 7351954 | ECH | |
Mtr8g0623 | 8 | 7349363 | 7351954 | Mtr3g3818 | 3 | 52005685 | 52008143 | ECH | |
Mtr8g0623 | 8 | 7349363 | 7351954 | Mtr1g0329 | 1 | 3738720 | 3741819 | ECH |