Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0606 ATGGCTAAGATGGAAACCTTAGAAAAAATCAAGTATAAAAACCTTGTCCCTTTATTGGGATACTGCAAAGTAGGAGAAGAGAGGCTACTTGTTTATGAATACATGGAATATGGAAGCCTAGAAGAGATGCTCCACAGAAGAATAAAGACATGTGATCGACGAATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGACTTTGTTTTCTGCATCATAATTGCATCCCTCACATCATACACAAAGACATGAAGTCAAGCAATGTATTACTTGACAATGAAATGGAGTCAAGAGTCTTGGATTTCGGAATGGCAAGACTAATAAGTGCACTTGATACACATCTCAGTGTAAGCACACTAGCAGGAACACCTGGATATGTTCCACCAAAGTATTACCAAAGTTTCAGGTGCACTGCAAAGGGTGATGTTTATTCATTTGGTGTTGTAATGATGGAACTTCTTAATGGGAAAAGGCCTGGTGATAAGGAGGATTTTGGTGACACAAACTTGGTTGGATGGGCTAAGATTAAGGTGCGCGAGGGGAAACAAATGGAAGTAATTATCACTGATTTGCTTTTGGAGACTCAAGGAGGAACAAATGAAGCAGAACTTAAAGAAGTAATTGGCACTTATAGGCAACTCATTTGA 660 0.3909 MAKMETLEKIKYKNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHRRIKTCDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHKDMKSSNVLLDNEMESRVLDFGMARLISALDTHLSVSTLAGTPGYVPPKYYQSFRCTAKGDVYSFGVVMMELLNGKRPGDKEDFGDTNLVGWAKIKVREGKQMEVIITDLLLETQGGTNEAELKEVIGTYRQLI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0606 219 SUPERFAMILY Protein kinase-like (PK-like) 4 191 IPR011009 -
Mtr8g0606 219 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 218 - -
Mtr8g0606 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Mtr8g0606 219 Gene3D Transferase(Phosphotransferase) domain 1 36 219 - -
Mtr8g0606 219 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 218 - -
Mtr8g0606 219 Pfam Protein kinase domain 4 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0606 219 SMART serkin_6 4 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0606 219 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Mtr8g0606 219 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0606 Mtr-Chr8 7222584 7223520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0606 1 201 Receptor kinase-like Gene Family AT1G55610 68.812 4.33e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr8g0606 Pkinase 2.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0606 - - mtr:MTR_3g117910 418.313