Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0602 ATGATGAGTGCAAGTTCAAGAAATAGGTCACTTTTCACACCAAATCAATGGCAAGAACTTGAACAACAAGCCCTAGTTTTTAAATACATGGTTACTGGAACACCTATTCCACCAGATCTCATATACTCTATTAAGAGAAGTTTAGACACTTCAATATCTTCAAGAATCTTTCCTCATCCACCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGACTCAAAGTACTGTGAAAGACACATGCACAGAGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTAGTAGTTTCTTCTTCAACAACAACACCAACAAATAACACAAACACAGCATCTTCTTACAGCAACAGAAACATCTCCTTGAACAACAACAGCAGCAGCATAAACTCACCTTCTTCTTTCCCTTTCTCTACTTCATCCATGGCTTGTCATGATCAGTCACAATCTTTTTCACAATCCTACCAAAACTCTTCTTTAAACCCTTACTATTACTCTCAATCAATTACCTCTACTAAACCACTTGATCATTCTCATTTTCAAACTCAAGATGCTACTACTCATCACCTCTTTTTGGACTCAACATCTTATTCTCAGGATGACAAGGACTTTAGGAGGCAAGTTCAAGGAATAAGAGATGGTACTGTGGATGAGAGAACTTTCTTTCCAGAAGCTACAGGTTCATCTAGGAGCTGTTATCATGATTCATATCAACAACAACTATCAATGAATCCCTTTAAGTCTTACTCAAGCTCACAGTTTCAGAATATCAATGATGATAATTCAAGACAACAACAAGAACAACACTGTTTTGTTTTAGGCACTGACATCAAGTCAACAAGAACAACAAACAAGGACAAAGAAAGTGAGACAACTCAGAAACCACTTCATCATTTCTTTGGTGAGTGGACACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCTAACTCCAGAATTCCAACAGATGAGTGA 1047 0.3878 MMSASSRNRSLFTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRIFPHPPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVELVVSSSTTTPTNNTNTASSYSNRNISLNNNSSSINSPSSFPFSTSSMACHDQSQSFSQSYQNSSLNPYYYSQSITSTKPLDHSHFQTQDATTHHLFLDSTSYSQDDKDFRRQVQGIRDGTVDERTFFPEATGSSRSCYHDSYQQQLSMNPFKSYSSSQFQNINDDNSRQQQEQHCFVLGTDIKSTRTTNKDKESETTQKPLHHFFGEWTPKNTDSWLDLASNSRIPTDE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0602 348 PANTHER - 1 347 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mtr8g0602 348 MobiDBLite consensus disorder prediction 118 151 - -
Mtr8g0602 348 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 347 - -
Mtr8g0602 348 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr8g0602 348 MobiDBLite consensus disorder prediction 333 348 - -
Mtr8g0602 348 MobiDBLite consensus disorder prediction 329 348 - -
Mtr8g0602 348 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr8g0602 348 MobiDBLite consensus disorder prediction 107 151 - -
Mtr8g0602 348 Pfam QLQ 12 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mtr8g0602 348 Pfam WRC 77 119 IPR014977 -
Mtr8g0602 348 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0602 Mtr-Chr8 7194244 7196654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0602 3 326 GRF Transcription Factor Family AT3G13960 41.270 7.20e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mtr8g0602 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0602 - - vun:114166369 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0602 8 7194244 7196654 Mtr8g0602 8 7194244 7196654 ECH