Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0589 ATGCACAATATTAATCTTGTATTTTTTGTTTGTCTCTTGTTTATGTCGAAATTGAAAGGTGAAGTGGAAAACCCAACATCAGACACAAATTGTCCATATTCATCGGAATTTCAATGTTCAGTTCCTCAAAGTGACAAGCATGATGTCTTTGTTAGCTTTAGAGGTCTGGACATCCGTGAAGGTTTTCTTAGTCATTTGGTTGAAGCTTTATCTCGAAAGGAAATTGTTTTCTTTGTAGACAATAAGCTTAGAAAAGGTGATGAAATAGCACAATCACTTTTTGAAGCTATTGAAACATCTTCAATTTCATTAGTCATATTCTCTCAAAACTATGCTTCTTCAAAATGGTGTTTGGATGAGCTTGTCAAAATTGTTGAGTGTAGAGAGAAAGATGGACAGATTTTATTGCCTGTTTTTTACAAAGTTGACCCTACAGTTGTGAGGCATCAGAAGGGGACTTATGCAAATGCATTTGCAGAACATGAACAAAAGTACAATTTGAACAAGGTGAAACAGTGGAGAAGCTCTTTGAAGAAATCTGCAGATATCTCAGGGTTTCATTCATCACAATTTTTGTATGATGCTGAACTCGTTGAAGAAATAGTTAAAAGTGTGTTGAAGAGGTTGGATCATGTGCGTGTAGTTAATTCAAAAGGAGTTATTGGAATTGAAAAACAAATATCATATGTGGAATCATTGTTACAAGTAGAGTCACAAGATGTTCGTGCTATTGGAATTTGGGGGATGAGTGGTATTGGAAAGACAATTATTGTCGAAGGCGTATATAAGAGGCTATGTTCTGAATATGATGGTTGTTACTTTAAGGCTAATATAAGTGAAGAATGGGGAGGACATGAAAATATGTATTTAAAGAAAGATATTTTTTCTACTTTATTAGGAGAACATAATTTGAAATTTGACGCACAATATGGATTGCCCTATTTTGTTGAGAGGAGGCTTCGTCGTATGAAGGTTCTTGTTGTTCTTGACGATGTCAAGGATCCACAACAATTAGAAATTTTAATTGGAACACTTGATTGGTTTGGAACAGGTAGTAGAATCATTGTAACAACTAAAGATAAGCAAGTAGTTGCCAAAATGGTTGTTGATAATGATATATATGAAGTTAAAGCATTAGATTTTGATGACTCTTTTCGACCAATAAGCATCTCGCAATGTCTCAATATCACTCAACGCATGGAAATGGCTCATGAAGGTTCAAATATCTCAAATTCTATATTACTCAACATATGGAATTGGCTCTGGCAGACATTGATTGATTTTATTTATGTATGTGCAGTACAATTTTTCATGATGTTAGTCATATTTAGCGTGATTTACTTTTGCGTTGGTATTTTCATAACTGTAGTAAAAAATGTGTTTTACGTGTTGGAAGAAGTTCTATCGTGGATGCAATCCTTTTGTAAGTAA 1431 0.3396 MHNINLVFFVCLLFMSKLKGEVENPTSDTNCPYSSEFQCSVPQSDKHDVFVSFRGLDIREGFLSHLVEALSRKEIVFFVDNKLRKGDEIAQSLFEAIETSSISLVIFSQNYASSKWCLDELVKIVECREKDGQILLPVFYKVDPTVVRHQKGTYANAFAEHEQKYNLNKVKQWRSSLKKSADISGFHSSQFLYDAELVEEIVKSVLKRLDHVRVVNSKGVIGIEKQISYVESLLQVESQDVRAIGIWGMSGIGKTIIVEGVYKRLCSEYDGCYFKANISEEWGGHENMYLKKDIFSTLLGEHNLKFDAQYGLPYFVERRLRRMKVLVVLDDVKDPQQLEILIGTLDWFGTGSRIIVTTKDKQVVAKMVVDNDIYEVKALDFDDSFRPISISQCLNITQRMEMAHEGSNISNSILLNIWNWLWQTLIDFIYVCAVQFFMMLVIFSVIYFCVGIFITVVKNVFYVLEEVLSWMQSFCK* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0589 476 Gene3D - 44 206 IPR035897 -
Mtr8g0589 476 SMART till_3 46 183 IPR000157 GO:0007165
Mtr8g0589 476 Pfam NB-ARC domain 232 386 IPR002182 GO:0043531
Mtr8g0589 476 ProSiteProfiles TIR domain profile. 45 209 IPR000157 GO:0007165
Mtr8g0589 476 Gene3D - 207 375 IPR027417 -
Mtr8g0589 476 Pfam TIR domain 46 211 IPR000157 GO:0007165
Mtr8g0589 476 PRINTS Disease resistance protein signature 243 258 - -
Mtr8g0589 476 PRINTS Disease resistance protein signature 319 333 - -
Mtr8g0589 476 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 34 386 - -
Mtr8g0589 476 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 386 IPR044974 GO:0006952
Mtr8g0589 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 389 IPR027417 -
Mtr8g0589 476 SUPERFAMILY Toll/Interleukin receptor TIR domain 42 186 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0589 Mtr-Chr8 7030329 7036858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0589 44 385 WRKY Transcription Factor Family AT4G12020 30.172 4.12e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0589 - - cam:101503346 474.552