Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0588 ATGAGAATCATAACTTTATTTTTTGTTTATGTCACACTTTTGCTTATTTCAAAACCAAAAGGTGTAGTTGCAATTGCAAGCATAATTCCAATTCCAAACAACCAATACTATTCTACATGTCCTGTCATATTTTCTCCTTCTACTTCTATCCCTGCTCCTCAGATAAAATATGATGTCTTTGTTAGCTTTAGAGGCAGTGACATTCGCAAACACTTCCTTAGCCATGTCCTCGAAGCTTTGTCGCGAAAGAGAATCGTTGTTTTTTCTGACAAAAAGCTTAAAACAGGAGATGAATTATCAGCAATTCAAAGAGCAATTGAAAAATCATTCATTTCATTGGTTATATTCTCTCCAAACTTTGCATCTTCATATTGGTGTATGGAGGAGCTTGTGAAAATAGTTGAGTGTAGAGAAAAATATGGTAGGATTCTAATGCCAGTTTTCTACCAAGTAGAGCCCACAGTTGTAAGGTACCAAAATGGGATTTATAGAGATGCTTTTGCTCAACATGAACAAAATTATAGTTCTTACAAGGTTCTAAGGTGGAGATCTGCTTTGAAGCAATCTGCAAATATTTCTGGATTTGATTCATCACAATTTTCGGATGATGCTAAGCTTGTTGAAGAAATACTTCAAAGTGTGTTGATGAAGTTGAATCAAGTGGACCAAGGTAAGTCAAAAGGACTTATAGGAATTGAGAAACAAATTTCACCTATAGAATCAATGTTACATTTAGAGTCGGAAGATGTCCGTGTTCTTGGAATTTGGGGTATGCCAGGTATTGGTAAAACAACTATTGCTGAAGAAGTATTTCGAAGACTACGTTCTGAATATGAAACTTGTTGTTTTATGGCTAATGTAAGAGAAGAATCAGAAAGATATGGCACAAACAGTTTGAGGTTAAGAAAAAAGCTTTTATCCACTCTATTAGAGGATGAAGATTTGAAAGATGACATGATAAATGGATTACCACCTTTGGTTAAGAAAAGGCTTAGCCGCATGAAGGTTCTTATTGTTCTTGATGATGTCAAAGATGCGGAACAACTAGAAGTTTTGGTTGGAACAGTTGATTGGTTAGGACCAGGAAGTAGAATCATCATAACTGCTAGAGATAAACAAGTACTTTCTGGAAAAGTTGATGATATATATGAAGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAACTTGCATGCCTTTAATAAACAAAAGCATCTTGAAATGGAGTACTATAAGCTATCAAAGAAAATGGTGGATTATACCGCAGGTGTTCCACTGGTTCTTAAAGCTTTAGCTAACCTTCTTCGTGGGAAAGATAAAGCCATATGGGAAAGCCAATCAAGGAATCTTAAAATAGAGCAGATTGAAAATGTCCACGATGTTTTTAGATTGATATACACTAATCTTGATTATTATGAAAAGATCATATTCTTAGACATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGAACTCATAAATCTTCTATTGAAAGATCGTTATTATTCAGTAAGCACTAGATTGGAAAGGCTAAAAGATAAAGCTCTTGTAACTATTTCTCAACAAAGCATTGTATCAATGCATGACATTATACAAGAAACAGCTAGGGAGATTGTTCGCCAAGAATCTGTTGAAGAACCTGGAAACCGAAGCCGACTATTGGATCCTGATGACATTTATCATGTATTGAAAGATGACAAGCAGGGAAGTGAGGCCATCAGAAGTATGGCCATCAGACTATCTGAAATTAAGGAGCTGGAGTTGAGCCCTCAAGCATTTGCCAAGATGAGCAAATTGAAATTTTTGGATATTTATACAAAGGGGTCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTCGAATCCTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGAATTCTTGCCATCCAAGTTTTCTGCAGAAAACCTTGTTATATTGAACCTGCCTTATAGCCGATTGAAAAAACTTTGGCATGGAGCGAAGGATATTGTGAATTTGAATGTCCTTATACTCTCTTCATCCGCACTTCTAACGGAGCTACCAGACTTTTCAAAGGCCACAAATCTTGCAGTATTGGACCTCCAATCTTGTGTAGGGTTGACTAGTGTCCATCCATCTGTTTTCTCTCTCAAAAATCTTGAGAAATTGGATCTGAGTGGATGCAGTTCCCTGAAAAGCCTTCAAAGCAATACTCATTTAAGTTCCCTTAGTTATCTCTCCCTCTACAACTGCACAGCACTGAAGGAATTCTCAGTGACCTCGGAGAATATAAACGAGTTAGATTTAGAACTCACTAGTATCAAAGAATTACCATCATCAATTGGACTACAAACCAAACTTGAAAAGTTATATCTAGGACACACTCACATTGAAAGCTTGCCAAAAAGCATCAAGAATCTTACAAGGCTGAGACATCTGGACTTGCACCATTGCAGTGAACTTCAAACTCTACCAGAGCTTCCTCCATCACTAGAAACACTAGATGCTGATGGTTGTGTATCACTAGAGAATGTAGCGTTCCGTTCAACTGCTAGTGAACAACTGAAGGAAAAAAAGAAAAAGGTTACCTTCTGGAATTGCCTTAAATTAAATGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCTCAAATTAACATGATGAACTTTTCACACAAACATATTACATGGGACCGTGATCGTGATCATGATCACAATCAAGGCATGTATGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAGTACAACTAGACATGATTACATAACTATTGATCTTTTTTCTGCTCCTTATTTCTCAAAGTTGGGCTTCATTTTTGGCTTCGTCATTCCAACCATCTCATCAGAGGGTTCGACTTTGAAATTCAAAATCAGTGATGGTGAAGATGAAGGTATCAAAATGTATTTAGACAGACCACGTCACGGAATTGAATCAGATCATGTGTATCTAGTGTATGATCCAAGATGCTCTCATTACCTAGCTAGCCGAGTCAATGATCAGTCAAAGATCAAAATTCAGGTTAGAGTAGCATCAAGAACACCGACATCACCGTATGTGCCAGTCCAGTTAAGAGGGTTTGGGGTTAGCCTAGTAACCCCTTCACAGTATGACATGTTTAAACAGCAATTGGAATTTGGTGATGCAACTGTTTTTCCAAATAATACGTGTTCAGTGGAAGAGGGATCGAAGTTTTTTGGAACACATTGGTCATCATTGTTCTATAAGCTAGACACAATCCAAACGATGGCTGAAATAAAAGGCCTCAAGCACCATGATAACAAGACGGCGCACATATCAGCCTCAGGACCTATGAGAGACAAAGGAAAATCCACAATGCACATTAATCGTGCATTTTTTGTTTGTCTTTTGTTTATCTGGAAATTTAAGGGTGAAGTCGCAAGCACAAAACCAGACACAAATTTTCCATATACATTGAAGTTTCAATCTTCTGTTCCTCAAATTCACAAGTATGATGTCTTTGTTAGCTTTCGGGGTCCAGATATCCGTGAAGTTTTTCTTCCTCATTTGATTAAAGCTTTTTCTCAAAAGAAAATTGTTTACTTTGTAGACTATAAGCTTACAAAAGGAAATGAAATATCACAGTCACTTTTTGAAGCAATTGAAACATCTTCAATTTCATTAGTCATATTCTCTCAAAACTATGCTTCTTCATCTTGGTGTTTGGATGAGCTGGTCAAAGTTGTTGACTGTAGAGAGAAAGATGGAAACATTTTATTGCCTGTTTTCTACAAAGTTGATCCCACAATTGTGAGGCATCAAAATGGAACTTATGCAGATGCATTTGTTGAACATGAACAAAAGTACAATTGGACCGTCGTACAACGATGGAGATCTGCTTTGAAGAAATCCGCGAATATCAATGGGTTTCATACATCAAAAAGATTGAATGATGCCGAACTTGTTGAAGAAATAGTAAAATTTGTTTTGAAGAGGTTGGATCATGTGCATCTTGTCAATTCAAAAGGACTTATTGGAATTGGCAAACAAATTTCACGTGTAGAATCATTGTTACAAGTAGAGTCGCAAGATGTTCGTGCTATTGGAATTTGGGGTATGAGTGGTATTGGAAAGACAACTATTGCAGAAGAAGTATATAGCATGCTATGTTCGGAGTATAGTGGTTGTTACTTCAAGGCCAATGTAAGAGAAGAATGTAGAAGACATGGAATAATACATTTAAAGAAAAAGCTTTTTTCTACTCTATTAGGGGAACAAGATTTGAAAATTGACACGCCACATAGATTGCCCTATCGCGATTTTGTGAGGCTTCGAACTATGAAGGTTCTTGTTGTTCTTGACGATGTGAGTGATCAAGAGCAACTAGATATTTTAATTGGAACACTTGATTGGTTTGGAAAAGGTAGTAGAATCATCATAACAACCGTAGATAAGCAAGTACTTGGCAAAGGGGTTTTTGCCAATGATATATATGAGGTTAGGCCATTAAACTTTGATGACTCTCTTAGGCTTTTCAATTTGAATGCTTTTGAACAAAATCAAACATATCAAATAGAGTACTATGAGTTGTCCAAGAGGATGGTCAAGTATGCCAAAGGAATCCCACTCATTCTTGAAATTTTAGGTCGTAAGCTGCGTGGAAAAGATAAAAAAGAATGGGAAGACCAATTAGAGAGGGTTAAAAAAGTTCCAATTAAAAAATTTCATGAAATTATTAGATTGAGTTACAATGATCTCAATCGTCATGAGAAGAGGATGTTTTTAGACATTGCGTGTTTCATAGATGGATTGCATCTCAATGTTGACGACATAAAATTGTTAGCAAAAGATCTAGGTTATCCGGTGGGTGTTGAGTTAGAAAGTCTAAAAAATAAAGCACTTATAAATATTTCTCCAGATAATGTTGTATCCATGCACACCATTATACAAGAAACAGCTTGGGAATTTGTTCGCGAAGAATCCATTGATGATCCTGAAAATCAAAGTCGACTAGTGGATTATGACACTTATCAAGTACTAAAACATAACAGGGGGAGTGAGGCTATTCGAAGTATAGCTACCGACTTTTCAATAATTAAGGATCTGCAGTTAAATTCCAAGGTCTTTGCTAAGATGAACAAACTACAATATCTGGATATCTATACTAAAGGATATTATGTGTTTTTCCAAATTCCTCGAAGCTTGAATCTTCCTCAAGGGCTTAAATCTTTGCCAGATGAACTCAGATATCTTCGTTGGGCATATTACCCCTTAGAGTCTTTACCATCTAAGTTTAATGGGGAGAAACTTGTTGTGTTGAACTTGCAGAACAGCCAAGTCAAAAAACTTTGGCATGAAGATAAGGATGTTGTGAATTTGAAGTTTCTAATATTGAGTTTATCCTCACAACTGATGGAGCTTCCAAACTTGTCAAAGGCTAAAAATCTTGCAATAGTTGATCTTCGCATGTGTGGACGGCTGACTAGTATACACCCATCTGTATTTTCTCTGAACAAGCTTGAGAAATTGGATCTAGGTGGATGTTTTTCCCTCACAAGCCTCAAAAGCAACATTCATTTAAGCTCCCTTCGTTATCTATCACTTGCTGGTTGCATTAAACTAAAAGAGTTCTCAGTAACCTCAAAGGAAATGGTATTGTTAAATTTAGAGCACACAGGTATCAAACAACTGTCATCATCAATAGGACTTCAAACCAAACTTGAAAAGTTGCTTCTTTCACACAGTTTCATTGAGAACTTGCCTAAAAGCATCAGGCGCCTTTCAAGTCTGAGACATCTAGAATTACGACATTGTAGGAAGCTTCAACGTCTACCAAAGCTTCCTTCATCGTTGATAACTCTAGATGCCACCGGCTGTGTATCATTAGAGAATGTAACTTTCCCTTCAAGGGCTCTTCAAGTGTTAAAGGAAAACAAGACAAAGGTTTCTTTCTGGAATTGTGTGAAACTAGTTGAGCATTCTCTTAAAGCAATAGAATTGAATGCACAAATTAACATGATGAAATTTGCACACAAGCAAATATCTACATCCAGTGATCATGATTATGATGCTCAAGGCACATATGTGTATCCAGGAAGCAGTGTTCCAAAATGGTTGGTGTATAGAACAACACGTAATTACATGTTTATTGATCTCTCTTTTGTGAATCATTCCTCTGATCAATTGGCCTTCATATTTTGCTTTATTGTTCCACAAGTTGAATCAGAGGGTTTCATTTTGAGATTTAATATTAGTGTTGGCGGTGAAGCTGAAAATATTCAAGTATACTTGAATAAGCCTAGTCAAGAAATTAAATCAGACCATGTGTATCTGATGTGTGACCAAGGTTTGTCTCGCTATCTAAATAGCCGGGTGAAAAATCAGCCGAAGTTCAAAATTAAAGTTACAGCAGAATCAGGAACACCAACATTAGGGTACATGCCAGTAATGTTGTTGAGAGGGCTTGGGGTCAGCCCAATAAACATATCACAATATCTCAATTTCATTCAACAAATGGAAATTGTGGCTGAAGGTCCATGTATCTCATTTTCTTTAATGGGAAATGAAATTTATATACTTACAGTTTTCATAGGATTAGTCATAAAGAATGTTTTCTGTGCCGCTAATGAGTTTTTACTTTGA 6633 0.3667 MRIITLFFVYVTLLLISKPKGVVAIASIIPIPNNQYYSTCPVIFSPSTSIPAPQIKYDVFVSFRGSDIRKHFLSHVLEALSRKRIVVFSDKKLKTGDELSAIQRAIEKSFISLVIFSPNFASSYWCMEELVKIVECREKYGRILMPVFYQVEPTVVRYQNGIYRDAFAQHEQNYSSYKVLRWRSALKQSANISGFDSSQFSDDAKLVEEILQSVLMKLNQVDQGKSKGLIGIEKQISPIESMLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSEYETCCFMANVREESERYGTNSLRLRKKLLSTLLEDEDLKDDMINGLPPLVKKRLSRMKVLIVLDDVKDAEQLEVLVGTVDWLGPGSRIIITARDKQVLSGKVDDIYEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSKKMVDYTAGVPLVLKALANLLRGKDKAIWESQSRNLKIEQIENVHDVFRLIYTNLDYYEKIIFLDIACFFDGLKLKLELINLLLKDRYYSVSTRLERLKDKALVTISQQSIVSMHDIIQETAREIVRQESVEEPGNRSRLLDPDDIYHVLKDDKQGSEAIRSMAIRLSEIKELELSPQAFAKMSKLKFLDIYTKGSQNEGSLSLPQGLESLPNELRYLRWEYYPLEFLPSKFSAENLVILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLDLQSCVGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSSLSYLSLYNCTALKEFSVTSENINELDLELTSIKELPSSIGLQTKLEKLYLGHTHIESLPKSIKNLTRLRHLDLHHCSELQTLPELPPSLETLDADGCVSLENVAFRSTASEQLKEKKKKVTFWNCLKLNEPSLKAIELNAQINMMNFSHKHITWDRDRDHDHNQGMYVYPGSKIPEWLEYSTTRHDYITIDLFSAPYFSKLGFIFGFVIPTISSEGSTLKFKISDGEDEGIKMYLDRPRHGIESDHVYLVYDPRCSHYLASRVNDQSKIKIQVRVASRTPTSPYVPVQLRGFGVSLVTPSQYDMFKQQLEFGDATVFPNNTCSVEEGSKFFGTHWSSLFYKLDTIQTMAEIKGLKHHDNKTAHISASGPMRDKGKSTMHINRAFFVCLLFIWKFKGEVASTKPDTNFPYTLKFQSSVPQIHKYDVFVSFRGPDIREVFLPHLIKAFSQKKIVYFVDYKLTKGNEISQSLFEAIETSSISLVIFSQNYASSSWCLDELVKVVDCREKDGNILLPVFYKVDPTIVRHQNGTYADAFVEHEQKYNWTVVQRWRSALKKSANINGFHTSKRLNDAELVEEIVKFVLKRLDHVHLVNSKGLIGIGKQISRVESLLQVESQDVRAIGIWGMSGIGKTTIAEEVYSMLCSEYSGCYFKANVREECRRHGIIHLKKKLFSTLLGEQDLKIDTPHRLPYRDFVRLRTMKVLVVLDDVSDQEQLDILIGTLDWFGKGSRIIITTVDKQVLGKGVFANDIYEVRPLNFDDSLRLFNLNAFEQNQTYQIEYYELSKRMVKYAKGIPLILEILGRKLRGKDKKEWEDQLERVKKVPIKKFHEIIRLSYNDLNRHEKRMFLDIACFIDGLHLNVDDIKLLAKDLGYPVGVELESLKNKALINISPDNVVSMHTIIQETAWEFVREESIDDPENQSRLVDYDTYQVLKHNRGSEAIRSIATDFSIIKDLQLNSKVFAKMNKLQYLDIYTKGYYVFFQIPRSLNLPQGLKSLPDELRYLRWAYYPLESLPSKFNGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIVDLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSLAGCIKLKEFSVTSKEMVLLNLEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQRLPKLPSSLITLDATGCVSLENVTFPSRALQVLKENKTKVSFWNCVKLVEHSLKAIELNAQINMMKFAHKQISTSSDHDYDAQGTYVYPGSSVPKWLVYRTTRNYMFIDLSFVNHSSDQLAFIFCFIVPQVESEGFILRFNISVGGEAENIQVYLNKPSQEIKSDHVYLMCDQGLSRYLNSRVKNQPKFKIKVTAESGTPTLGYMPVMLLRGLGVSPINISQYLNFIQQMEIVAEGPCISFSLMGNEIYILTVFIGLVIKNVFCAANEFLL* 2211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0588 2210 SUPERFAMILY Toll/Interleukin receptor TIR domain 1162 1307 IPR035897 -
Mtr8g0588 2210 SMART till_3 56 192 IPR000157 GO:0007165
Mtr8g0588 2210 SMART till_3 1167 1304 IPR000157 GO:0007165
Mtr8g0588 2210 Gene3D - 388 472 IPR042197 -
Mtr8g0588 2210 Gene3D - 1500 1584 IPR042197 -
Mtr8g0588 2210 Pfam Leucine Rich Repeat 652 671 IPR011713 -
Mtr8g0588 2210 ProSiteProfiles TIR domain profile. 55 218 IPR000157 GO:0007165
Mtr8g0588 2210 Gene3D - 217 382 IPR027417 -
Mtr8g0588 2210 PRINTS Disease resistance protein signature 252 267 - -
Mtr8g0588 2210 PRINTS Disease resistance protein signature 330 344 - -
Mtr8g0588 2210 PRINTS Disease resistance protein signature 423 437 - -
Mtr8g0588 2210 PRINTS Disease resistance protein signature 718 734 - -
Mtr8g0588 2210 SMART AAA_5 249 380 IPR003593 -
Mtr8g0588 2210 SMART AAA_5 1361 1500 IPR003593 -
Mtr8g0588 2210 ProSiteProfiles TIR domain profile. 1166 1330 IPR000157 GO:0007165
Mtr8g0588 2210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1329 1594 IPR027417 -
Mtr8g0588 2210 Pfam NB-ARC domain 245 458 IPR002182 GO:0043531
Mtr8g0588 2210 Pfam NB-ARC domain 1351 1581 IPR002182 GO:0043531
Mtr8g0588 2210 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 1070 IPR044974 GO:0006952
Mtr8g0588 2210 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1154 2198 IPR044974 GO:0006952
Mtr8g0588 2210 SUPERFAMILY "Winged helix" DNA-binding domain 460 567 IPR036390 -
Mtr8g0588 2210 Pfam Leucine Rich repeats (2 copies) 788 831 IPR025875 -
Mtr8g0588 2210 SUPERFAMILY "Winged helix" DNA-binding domain 1571 1658 IPR036390 -
Mtr8g0588 2210 Gene3D Ribonuclease Inhibitor 1879 2026 IPR032675 -
Mtr8g0588 2210 Pfam TIR domain 1167 1331 IPR000157 GO:0007165
Mtr8g0588 2210 Pfam TIR domain 56 224 IPR000157 GO:0007165
Mtr8g0588 2210 SUPERFAMILY L domain-like 581 873 - -
Mtr8g0588 2210 Gene3D Ribonuclease Inhibitor 764 881 IPR032675 -
Mtr8g0588 2210 Gene3D - 1333 1489 IPR027417 -
Mtr8g0588 2210 Gene3D Ribonuclease Inhibitor 559 763 IPR032675 -
Mtr8g0588 2210 Gene3D Ribonuclease Inhibitor 1677 1878 IPR032675 -
Mtr8g0588 2210 SUPERFAMILY Toll/Interleukin receptor TIR domain 48 195 IPR035897 -
Mtr8g0588 2210 Gene3D - 54 216 IPR035897 -
Mtr8g0588 2210 Gene3D - 1165 1332 IPR035897 -
Mtr8g0588 2210 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1154 2198 - -
Mtr8g0588 2210 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 43 1070 - -
Mtr8g0588 2210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 482 IPR027417 -
Mtr8g0588 2210 SUPERFAMILY L domain-like 1692 1989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0588 Mtr-Chr8 7015485 7028298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0588 57 829 WRKY Transcription Factor Family AT4G12020 36.433 6.05e-122 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0588 - - mtr:MTR_8g020360 1660.2