Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0586 ATGGAAACAGTTGTTGAAATTGAGGATTATGATGATGGGAAGCTTGGAGACAGTGGGATTGATAGAAGCAGTCATGCTTTGTCTTCACCGAAGCGGATTTCCAATCCAGTTGTGTACAAACTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGGTCGAGGATTTTCTTGAATATGAAAACAGTGAAATGCGTGTTGTTGCAGACACTGGACAGAGTATGGAATGCATATCAATCGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCGGAAGGCGTTTCACAATTAGGCACTGCAGAGGCAGATTTGGGGAAGCTAAATGCAAAGTTTCAGTATATTGAACAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCGTCTCGGTCACCTGTTCATTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAGTTTCCTGTCAGAAATGAGAAGGTTCTGTCTGAAACTCCATTCCAGGAAGCACATTCTATAGCATCAAGTTTAAATTATAGTCTTAGTAATCAATCTGGGAGTATCGATCAGTGTTCTAGACCTTCTGGAGGAGTGATAGAAAGTGGTTCATCTGCTTCTGCTGTCAATTCCGCTTTGAAGCATGATTTTTCCATGACAGACGGAGAAATATGTTTGGATAAGTTGTCGATCAAAGAACTTCATGAACTGTTTAAGGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAGGAGGAGGATTGCTATGAGTTTAACTAACTCATGCGATGTTTCAGCAACAACATTCACTGTTAAAGATAACAAAATAACTAGAAAATGTGAAGAAGAATGTTCTAGAAATGTGAATGCTGCAGCTGTAATCTCTGTGGAAAATATGGCTGTGCAAAGGGATATCAAGTATAATGATTCAAATGCCGTGGGTGGTTGCGAAGTTGATAATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCTTAATATTGAACATGAATTAGAAGATGAGGATCAGCTGAGAGAACAAAGAGCTGCGAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGCAAATTCCTAGGTCGTCAAGTTCTAATAAAAGTACGGGACACATGCAGGCTTCTCCAACATCTTATGCTGGGCCTGCTAGGAATGCTTATCCAGAGACAAGAACATTTACCACCAGGTTAGACTCTCTTGGAGGTTCTGGTTTCCAAATTCCTTGTGTTACTCGGGTGCGAAGAAGTCGTCCACGGAAAAATATCACTTCTCTTATGAAATTCCATCCAACTGGCACAGGCGAGGCTGCAAAGTTAGGCAATAAAGTCGTTAGCAATCATGGTTCTGATGCTGATAGTGAAATTGAGGACAAATTCATAAAGCCAAGTTCAATGCATGTGAAGGTTCATCAGACGTCTACTTCTGAGTCTACGAAAGAGAAGAAGCAGTATCCGGTAATGATTGGCACAACTGATCCAAGGCAGGAATTGAGGCCTAAAAAGATAGATTCCTCAAGTCATGCCACAGAGGGCAATATTCCCACTGCTAAAGGTGGAATGAGGAGGAAGCATCATCGAGCATGGACTCTTGTTGAGGTATTGAAACTGGTTGATGGTGTGTCGCGGTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCTCTCCTTTTCTTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACCGACATCTGCAGATGAAGGGATGAATTCGCGGAAGCATGGTTCCGCCCCAATTCCTGAGCCAATTTTAGTACGTGTGAGAGAGCTAGCAGAGATAAATTCTCAAGTACCTTCAAATTCCAGTTCAAGCAAGTTCACAGCTAATGGGGCAACTAATGGTGCAAGGAGTATGCATGGAGACAGAGTGGGGTACTTGTAG 2004 0.4251 METVVEIEDYDDGKLGDSGIDRSSHALSSPKRISNPVVYKLVRVEGDGRLVPATDDEVMEVEDFLEYENSEMRVVADTGQSMECISIERSSSGKLRLECSEGVSQLGTAEADLGKLNAKFQYIEQMLQKVKQEEKLRLSSRSPVHSHVQIDSQCSADKFPVRNEKVLSETPFQEAHSIASSLNYSLSNQSGSIDQCSRPSGGVIESGSSASAVNSALKHDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLRRRIAMSLTNSCDVSATTFTVKDNKITRKCEEECSRNVNAAAVISVENMAVQRDIKYNDSNAVGGCEVDNNQVASETRLENLNIEHELEDEDQLREQRAAKRMRKPTKRYIEELSENESREQIPRSSSSNKSTGHMQASPTSYAGPARNAYPETRTFTTRLDSLGGSGFQIPCVTRVRRSRPRKNITSLMKFHPTGTGEAAKLGNKVVSNHGSDADSEIEDKFIKPSSMHVKVHQTSTSESTKEKKQYPVMIGTTDPRQELRPKKIDSSSHATEGNIPTAKGGMRRKHHRAWTLVEVLKLVDGVSRCGPGRWSEIKRLSFSSYSHRTSVDLKDKWRNLLKASFAPTSADEGMNSRKHGSAPIPEPILVRVRELAEINSQVPSNSSSSKFTANGATNGARSMHGDRVGYL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0586 667 MobiDBLite consensus disorder prediction 519 543 - -
Mtr8g0586 667 CDD SANT_TRF 548 598 - -
Mtr8g0586 667 SUPERFAMILY Homeodomain-like 544 604 IPR009057 -
Mtr8g0586 667 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 666 - -
Mtr8g0586 667 PANTHER TRF-LIKE 3 1 666 - -
Mtr8g0586 667 MobiDBLite consensus disorder prediction 379 402 - -
Mtr8g0586 667 MobiDBLite consensus disorder prediction 358 378 - -
Mtr8g0586 667 ProSiteProfiles Myb-like domain profile. 550 597 IPR001005 -
Mtr8g0586 667 Pfam Myb-like DNA-binding domain 549 597 IPR001005 -
Mtr8g0586 667 SMART sant 546 599 IPR001005 -
Mtr8g0586 667 MobiDBLite consensus disorder prediction 358 407 - -
Mtr8g0586 667 MobiDBLite consensus disorder prediction 637 655 - -
Mtr8g0586 667 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 542 601 IPR017930 -
Mtr8g0586 667 MobiDBLite consensus disorder prediction 637 667 - -
Mtr8g0586 667 Gene3D - 537 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0586 Mtr-Chr8 6994380 7003345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0586 550 596 Single Myb Histone (SMH) Gene Family AT1G72740 46.939 8.25e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr8g0586 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0586 - - mtr:MTR_8g020330 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0586 8 6994380 7003345 Mtr8g0586 8 6994380 7003345 ECH