LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g0584	ATGAAAATTTGTGAATCCAGTAGTAGCATAAGTTTGTTTCTTTATCTCACTCTCTTGCTTATTTTAAAACCGAGGGGTGTAGTTCCAAATCCAATTTCAAACAAGATATTTTCTCCTTCTACTTCTATCCCTGCACCTCAGATAAAATATGATGTCTTTGTTAGCTTTAGAGGTAGTGACATTCGCAAAAATTTCCTTAGCCATGTCCTCGACGCTTTGTCGCGAAAGGGAATCATTGTTTTTTCTGACAAAAAGCTAATAACAGGAGACGAATTATCAGCAATTCAAAGAGCAATTGAAAAATCATTGATTTCATTGGTCATATTTTCTCCAAACTTTGCATCTTCACATTGGTGTTTGGACGAGCTTGTGAAAATAGTCGAGTGCAGAGCAAATTATGGTAGGGTTCTAATGCCAGTTTTCTACCAAGTATATCCCTCAGATGTACGGCATCAAAATGGGACTTATAGAGATGCTTTTGCTCAACATGAACAAAAGTATAGTTCCTACAAGGTGCTAAGCTGGAGATCTGCTTTGAAGCAATCTGCTAATATGTCTGGATTTGATTCATCACTTTTTTCGGATGATGCTAAGCTTGTTGAAGAAATAGTTCAAAATGTGTTGATCAAGTTGAATCAAGTGGACCAAGGCAAGTCAAAAGGACTTGTAGGAATTGAAAAGAAAATTTCACCTATAGAATCATTGTTACATTTAGAGTCAGAAGATGTTCGTGTCCTTGGAATTTGGGGTATGCCTGGGATTGGTAAAACAACTATTGCTGAAGAAGTATTTCGTAGACTACGTTCTAAGTACGAAAGTTGTTATTTTATGGCTAATGTAAGAGAAGAATCAGAAAGATGTGGAACAAACAGTTTGAGGTTAAGAAAAATTATTTTATCCACCCTATTAAAGGAAGAAAATTTGAAAGATGAACTGATAAATGGGTTACCTCCTTTGGTTAAGAAAAGGCTTCACCGTATGAAGGTTCTTATTGTTCTTGACGATATCAAAGATGCAGAGCAACTAGAAGTTTTGATTGGAACAGTTGATTGGTTAGGACCAAGAAGTAGAATCATCATAACTACTAGAGATAAGCAAGTACTTGCTGGAAAAGTTGATGATATATACGAGGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAATTTGCACGCCTTTACTAAACATGAGCATCTCGAAATGGAGTACTATGAGCTATCAAAGAAGATGGTCGATTATACCGCAGGTGTTCCACTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGGGAAAGATAAGGACATATGGGAAAGCCAGGCAAAGATTCTGAAAATAGAGCAGATTGAAAATGTCCATGTTGTATTTAGATTGATATACACTAATCTTGATTCTCATGAAAAGAATATATTATTGGATATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGACCTCATAAAACTTCTATTGAAAGATCGCCATTATTCGGTAAGCACTAAATTAGACAGGCTAAAAGATAAAGCTCTTGTAACTATTTCTCAACAAAGTATAGTATCAATGCATGACATTATACAAGAAACAGCTTGGGAAATTGTTCGCCAAGAATCTGTTGAAGAACCTGGAAGCCGAAGCCGACTATTGAATCCCGATGATATTTATCATGTGTTGAAAGATGACAAGGGAGGTGAGGCCATCAGAAGTATGGCCATCAGATTATCTGAAATTAAGGAGCTGCACTTAAGCCCTCGTGTATTTGCGAAGATGAGCAAATTGAAATTTTTGGATATTTACACCAACGGATCTCAGAATGAAGGAAGGTTGTCTCTTCCTCGAGGGCTTGAATTTTTGCCTAACGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGAATCCTTACCATCCAAGTTTTCTGCAGAAAACCTTGTTAGATTGAGCTTGCCTTATAGCCGATTGAAAAAACTTTGGAATGGAGTGAAGGATATTGTGAATTTGAATGTCCTTATACTCTCGTCATCCACATTCCTAACAGAACTACCAGACTTTTCAAAGGCCGCAAGTCTTGAAGTTATAAACCTCCGACTCTGTGTAGGGTTGACTAGTGTCCATCCATCTGTTTTGTCTCAAAAAGCTCAAGGAACTGGATCTGAGTGGATGCATTTCCCTTACGAGCCTTCAAAGCAATGA	2196	0.3725	MKICESSSSISLFLYLTLLLILKPRGVVPNPISNKIFSPSTSIPAPQIKYDVFVSFRGSDIRKNFLSHVLDALSRKGIIVFSDKKLITGDELSAIQRAIEKSLISLVIFSPNFASSHWCLDELVKIVECRANYGRVLMPVFYQVYPSDVRHQNGTYRDAFAQHEQKYSSYKVLSWRSALKQSANMSGFDSSLFSDDAKLVEEIVQNVLIKLNQVDQGKSKGLVGIEKKISPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSKYESCYFMANVREESERCGTNSLRLRKIILSTLLKEENLKDELINGLPPLVKKRLHRMKVLIVLDDIKDAEQLEVLIGTVDWLGPRSRIIITTRDKQVLAGKVDDIYEVEPLDSAESFQLFNLHAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKALANLLCGKDKDIWESQAKILKIEQIENVHVVFRLIYTNLDSHEKNILLDIACFFDGLKLKLDLIKLLLKDRHYSVSTKLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSRSRLLNPDDIYHVLKDDKGGEAIRSMAIRLSEIKELHLSPRVFAKMSKLKFLDIYTNGSQNEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWNGVKDIVNLNVLILSSSTFLTELPDFSKAASLEVINLRLCVGLTSVHPSVLSQKAQGTGSEWMHFPYEPSKQ*	732

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g0584	731	Pfam	NB-ARC domain	239	453	IPR002182	GO:0043531
	Mtr8g0584	731	SMART	till_3	49	185	IPR000157	GO:0007165
	Mtr8g0584	731	SUPERFAMILY	L domain-like	573	711	-	-
	Mtr8g0584	731	ProSiteProfiles	TIR domain profile.	48	211	IPR000157	GO:0007165
	Mtr8g0584	731	Gene3D	-	381	465	IPR042197	-
	Mtr8g0584	731	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	45	711	IPR044974	GO:0006952
	Mtr8g0584	731	SUPERFAMILY	"Winged helix" DNA-binding domain	453	560	IPR036390	-
	Mtr8g0584	731	Gene3D	-	210	374	IPR027417	-
	Mtr8g0584	731	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	219	475	IPR027417	-
	Mtr8g0584	731	Gene3D	-	47	209	IPR035897	-
	Mtr8g0584	731	Pfam	Leucine Rich Repeat	644	663	IPR011713	-
	Mtr8g0584	731	PRINTS	Disease resistance protein signature	245	260	-	-
	Mtr8g0584	731	PRINTS	Disease resistance protein signature	323	337	-	-
	Mtr8g0584	731	PRINTS	Disease resistance protein signature	416	430	-	-
	Mtr8g0584	731	PRINTS	Disease resistance protein signature	663	679	-	-
	Mtr8g0584	731	SUPERFAMILY	Toll/Interleukin receptor TIR domain	41	188	IPR035897	-
	Mtr8g0584	731	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	45	711	-	-
	Mtr8g0584	731	Gene3D	Ribonuclease Inhibitor	563	714	IPR032675	-
	Mtr8g0584	731	Pfam	TIR domain	49	221	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g0584	Mtr-Chr8	6977756	6983193	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g0584	50	699	WRKY Transcription Factor Family	AT4G12020	35.401	5.87e-110	365

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g0584	-		-	mtr:MTR_8g020360	1339.71