Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0577 ATGTTGACTTGCATAGCTTGTTCAAAGCAACTCAATAATGGATCTCTTCATCAACAAGAAGAAGATGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGACATGGCAGTAAAGGCTTCTGGGGCATATAAGAATTGCAAGCCTTGTTCAGGATCTTCAAATGGTAACAAGAACAAAAAATATGCTGATTCTGACATGGGATCAGATTCAGCAAGGTTCAACTGGGCGTACCGAAGAACCGGGAGCGCAAGTTCAACACCAAGAATGTGGGGGAAGGAAATGGAAGCGAGACTCAAAGGGATTTCAAGTGGAGAAGGAACACCAACATCGGTGAGCGGACGTACCGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAACCTGGTGTGCTTATTACTTTTGTTTCATTGCCTGAAGGTGGGAATGATTTGAAGAGGATACGGTTCAGTCGCGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCGGAGAACTATGACAAGGTTATGGAACTGTACAATGTTCAAAGGTTCAATCAAGAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGTTCGAAGATTGAATCTGCGAGGGACAGCCCCGTCACACCTCCTCTAACCAAAGAGCGCCTGCCCCGTCATTTGCACCACCCAATGACAATGGGCTACTCCTCATCAGATTCACTGGATCACCACCATATGCAACCTCAACCTTGCTATGAAACAAGTGGTCTGCCATCAAAATCTAATCTTTCCAACATTGGTGTGCCAAAGACCGAAAGATCATCCATTGATGCTTCTGTAAGGACGAGTTCATCAGAAGAGGAAGATCACTCAGGTGAGCTCTCAATCAGCAATGCCAGTGACATGGAAACTGAATGGGTTGAACAGGACGAACCGGGAGTATACATCACTATCAGAGCACTACCAGGTGGAACCAGAGAACTTAGGCGTGTCCGTTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCGAGGATACAAGAGCAATATTTGTGA 1110 0.4604 MLTCIACSKQLNNGSLHQQEEDEAVQTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNKNKKYADSDMGSDSARFNWAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPEGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQEAVPLPTPPRSEDESSKIESARDSPVTPPLTKERLPRHLHHPMTMGYSSSDSLDHHHMQPQPCYETSGLPSKSNLSNIGVPKTERSSIDASVRTSSSEEEDHSGELSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0577 369 MobiDBLite consensus disorder prediction 262 291 - -
Mtr8g0577 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
Mtr8g0577 369 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Mtr8g0577 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Mtr8g0577 369 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Mtr8g0577 369 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 369 - -
Mtr8g0577 369 MobiDBLite consensus disorder prediction 201 310 - -
Mtr8g0577 369 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Mtr8g0577 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0577 Mtr-Chr8 6896414 6900949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0577 1 369 Major Intrinsic Protein MIP AT1G31880 47.287 1.46e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0577 - - gmx:100805480 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0577 8 6896414 6900949 Mtr8g0577 8 6896414 6900949 ECH