Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0553 ATGATTACTAATGAATTAGGAGCTGCCACCGCCGCCAAAACCACCGTCATTGCCATCAACACCGGTCGGAATAGCCAGTGCGCGGTGAAATGGGCGGTGGACCACCTTCTAAAGAAGAACTCCAATTGCATTCTCATTCATGTTCGTACCAAACCTCTCAATTCCAGTGATCATATTGTCGATGTTCCTAAACATGGTCGTCCACCAACTCATGAAGAATTGCACCAATTTTTTCTTCCCTTCCGTGGATTTTGTGCTAGAAAAGGGATTGAGGCAAAGGAATTGGTCTTGCATGACATTGATGTTCCTAGTGCTCTTACTGCTTATGTCATCGAAAATTTTATCAACTATGTTGTCATTGGTGCTTCTGCTTCCCCTTGGAGTGTTCTTATAAGAAAATTTAAAGAAGTGGATATGTCATCTACCTTAGCTAAGTCATTGCCTAAATCAAGCACATTGTATGTTATATCAAAAGGAAATGTACAACATATTCGACCAACAGGACCTATAAGAGACATAGTTACACTCTTGCAGAATGATCAATTGATGCAGCCAAATAAACTTTTTGCTCATACCCCTAATTGTGAAGATTTAAACAGGAAACCATTCAAAGATGCAAACAAAGCCTGGGAACCATTACATGATATGAAAGATGTTACACTGATGACACCATGTAAATCCAATATTCTTGAAGATAACAATTCACCCAGAGGTCCAAGATTATCAGCCGGAAGCTCCTCGTCGCAAACTTCATCGAATAGAAGTTCTCCTGCCAATAGTAATGATAGTTCAGGGAAACATGGAAATCATGAAGTTATAAATTCAGACAATACTAAGCGCTTACTTTCTTCAAAACCACCATTGCAGATAAGGATTGAGGCAAAAATAAAGAAATTAAAACTAGAATTGAAGAAAACAACTGAGCAGTATGGTATGGCATGCAGAGAAGCTGTCTTAGCAAAACTGAAGGCAAGTGAAATTGAAAAGTTTAGAGAAGAAGAAGAGCAAAATGTTGAAAAAGCAAGGCTTGCTGAAGAGGCTGCATTAGCTTTAGCTGAAGTAGAAACACAGAAAGCAAAAGCTGCTTTGGAAGCGGCCGAAATGTCACAGCGTCTTGCGGAAATAGAAACTCAAAAGAGAAAGCTAGCTGAATTAAAAGTGAAACATGAGAAAGAACAAAGGATAAGAACATTGCAAGAAGTTGTGTATAATAGCATTCCATATAGAAGATATGATATTAAAGAAATTCAAGTTGCAACTAATGGCTTTGACAATGCTCTCAAAATTGGTGAAGGGGGGTATGGACCTGTTTTTAAAGGTGTGCTTGATCACACTATTGTTGCTATAAAAGTTCTTAAACCTGATTTAGCTCATGGAGAGAGGCAATTTCAACAAGAGGTTCTTATTTTAAGCAAAATTAGACATCCCAACATGGTGCTCCTTCTAGGTGCATGTCCAGAATTTGGATGCCTTGTGTATGAACACATGGAAAACGGAAGTTTAGAAGATCGTTTATTCCAAAAAGACGAGACTCCACCAATTCCATGGAAAAATCGTTTTAAAATTGCATATGAGATTGCCACTGGCCTTCTTTTCCTTCACCAATCAAAGCCAGATCCAATAGTACATCGTGATATGAAACCAGGAAACATTCTCTTAGACAAAAACTACGTTAGCAAGATCAGTGATGTTGGTTTGGCGCGACTCGTTCCTGCTTCAATAGCCAACAAAACCACTCAATATCGCATGACAGGCGCAGCTGGAACATTTTGCTACATTGATCCTGAGTATCAACAAACTGGATTATTGGGTGTGAAATCAGATATATTTTCATTTGGTATGATTTTGCTACAAATTATCACTGCAAAGCCTCCAATGGGTTTATCTCATATAGTTGAAGAAGCTATAAAAAAAGGAAACTTCATGAACGTGCTTGATCCAAATGTACCAAATTGTCCTGTTGAAGAGGCTTTGGCATGTGCTAAGCTGGCTTTAAAGTGTATTGAGTATAGAAAACGTGATAGACCTGATCTTGCTACTGTTATTTTGCCAGAGCTGAATCGAATATCACATATTTGGAACTCTGATGAGGAATAA 2097 0.3844 MITNELGAATAAKTTVIAINTGRNSQCAVKWAVDHLLKKNSNCILIHVRTKPLNSSDHIVDVPKHGRPPTHEELHQFFLPFRGFCARKGIEAKELVLHDIDVPSALTAYVIENFINYVVIGASASPWSVLIRKFKEVDMSSTLAKSLPKSSTLYVISKGNVQHIRPTGPIRDIVTLLQNDQLMQPNKLFAHTPNCEDLNRKPFKDANKAWEPLHDMKDVTLMTPCKSNILEDNNSPRGPRLSAGSSSSQTSSNRSSPANSNDSSGKHGNHEVINSDNTKRLLSSKPPLQIRIEAKIKKLKLELKKTTEQYGMACREAVLAKLKASEIEKFREEEEQNVEKARLAEEAALALAEVETQKAKAALEAAEMSQRLAEIETQKRKLAELKVKHEKEQRIRTLQEVVYNSIPYRRYDIKEIQVATNGFDNALKIGEGGYGPVFKGVLDHTIVAIKVLKPDLAHGERQFQQEVLILSKIRHPNMVLLLGACPEFGCLVYEHMENGSLEDRLFQKDETPPIPWKNRFKIAYEIATGLLFLHQSKPDPIVHRDMKPGNILLDKNYVSKISDVGLARLVPASIANKTTQYRMTGAAGTFCYIDPEYQQTGLLGVKSDIFSFGMILLQIITAKPPMGLSHIVEEAIKKGNFMNVLDPNVPNCPVEEALACAKLALKCIEYRKRDRPDLATVILPELNRISHIWNSDEE* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0553 698 Gene3D HUPs 11 152 IPR014729 -
Mtr8g0553 698 Gene3D Transferase(Phosphotransferase) domain 1 496 697 - -
Mtr8g0553 698 MobiDBLite consensus disorder prediction 227 284 - -
Mtr8g0553 698 Pfam Protein tyrosine and serine/threonine kinase 428 681 IPR001245 GO:0004672|GO:0006468
Mtr8g0553 698 ProSiteProfiles Protein kinase domain profile. 423 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0553 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Mtr8g0553 698 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 14 692 - -
Mtr8g0553 698 PANTHER OS02G0152300 PROTEIN 14 692 - -
Mtr8g0553 698 CDD STK_N 14 159 - -
Mtr8g0553 698 Coils Coil 340 395 - -
Mtr8g0553 698 Gene3D Phosphorylase Kinase; domain 1 402 495 - -
Mtr8g0553 698 SMART serkin_6 423 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0553 698 Coils Coil 289 309 - -
Mtr8g0553 698 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 123 - -
Mtr8g0553 698 SUPERFAMILY Protein kinase-like (PK-like) 398 682 IPR011009 -
Mtr8g0553 698 CDD STKc_IRAK 429 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0553 Mtr-Chr8 6549429 6554174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0553 10 692 Receptor kinase-like Gene Family AT1G78940 45.330 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr8g0553 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0553 - - gmx:100799611 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0553 8 6549429 6554174 Mtr8g0553 8 6549429 6554174 ECH
Mtr8g0553 8 6549429 6554174 Mtr2g3466 2 48787115 48789816 PCT