Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0528 TTTTTTTATTCTGTTTCCGAAGGTTTTGGGAGGCCCTCTTCAATCAAGCAGTTTTATGTGGATGTTGACAAGGAAGAGTGGAAGCTAGAGACACTATGTGACATATTTGAGCTGACCCTTAAAGCTAAATCCATCACTCATTGTATCGTCTTTGTGAATACCATGGACAAAGTGGACTGGCTCATGGACGAGTTGCGAAGCAGAGATCATAAAGTGTTTGTCATCCTCAAGTTTTTTTCCCAGGACATTAGGGATATAGTTACGCGCGAGTTTTTTTCCCAGTCTAGCTCTCCTCAAGTTCTCATTACCACCGACCCCCAGCTTTGTGGTGCAGATGTGCATAAAGCGTCTCTGATCGTAAACTATGATCTCCCAACTGTGCCTGAAAACTATCTTCACCGTATAGGCCGGAGTGAGAAATTTGCTATAAACTTCATGACAGAGGATGAGACTAGTATGATCATAGATATTCAGAAATTCTACAATATGGTTATAGAGGAGCTGCCATGCAATTTTGAAGATTTGCTCTGA 531 0.4162 FFYSVSEGFGRPSSIKQFYVDVDKEEWKLETLCDIFELTLKAKSITHCIVFVNTMDKVDWLMDELRSRDHKVFVILKFFSQDIRDIVTREFFSQSSSPQVLITTDPQLCGADVHKASLIVNYDLPTVPENYLHRIGRSEKFAINFMTEDETSMIIDIQKFYNMVIEELPCNFEDLL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0528 176 CDD SF2_C_DEAD 15 137 - -
Mtr8g0528 176 Gene3D - 11 176 IPR027417 -
Mtr8g0528 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 174 IPR027417 -
Mtr8g0528 176 Pfam Helicase conserved C-terminal domain 28 138 IPR001650 -
Mtr8g0528 176 PANTHER RNA HELICASE 13 176 - -
Mtr8g0528 176 SMART helicmild6 59 139 IPR001650 -
Mtr8g0528 176 PANTHER EUKARYOTIC INITIATION FACTOR 4A-1 13 176 - -
Mtr8g0528 176 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 14 176 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0528 Mtr-Chr8 6263254 6263784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0528 14 176 Eukaryotic Initiation Factors Gene Family AT1G72730 58.929 9.06e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0528 K03257 - mtr:MTR_8g018330 347.436