Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0526 ATGGAACCTCGAATTGGGAATAAGTTCCGTCTTGGGAGAAAAATTGGTAGCGGATCTTTTGGAGAGATCTATTTAGGTACCAATATTCAAACAAATGAAGAAGTTGCGATTAAGCTTGAAAATGTCAAAACCAAGCACCCTCAATTGTTGTATGAAGCAAAGCTGTATAAAATACTGCAAGGAGGAACTGGAATACCGAATGTGAAATGGTCCGGTGTCGAAGGAGAGTACAACATCCTTGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAATAGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAAATGATAAATCGAGTTGAATTTGTTCATACCAAGTCATTTTTACATCGGGACATAAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTACATCATTGACTTTGGTCTTGCTAAGAAATTCAGAGACAGTGCACATCAGCATATTCCCTACAGAGAGAATAAGAATCTGACGGGAACTGCTAGATATGCCAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCGCTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGTCTACCTTGGCAGGGATTAAAAGCAGGTACTAAAAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACATCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTATTGCCGGTCACTGAGGTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTGCGTGACCTATTCATCCGTGAAGGATTCCAGTTTGATTACGTCTTCGATTGGACTATCTTGAAATATCAGCAGTCTCAAATCGCCACTCCTCCTTCCCGTGGTATTGGTCTTGCTGCTGGACCGAGTTCTGGTCTGCCGCTAGCTTCTGCAAATGCTGATGGACAGTCAGGTGGTGGAAAAGATGGTAGGAATATTGGGTGGTCTTCGTCTGATCCCACTCGAAGGAGAACCTCTGGACCTATTGCTAATGATGGAATCTTATCTAGAGAAAAAGCCCCACTTACAAATGACTTAACCGGATCTAAAGATGCTATGTTATCAAGTTCAAATTTCTTTCGGTCAAGCGGATCTGCAAGGCGAGGTGCTATGTTAAGCAGCCGTGATGCAGCTGTTGGCAGTGAGACGGAGCCCTCCTCTCGTCCTCTCACGCTGGATTCAAGTCTAGGAGCAGTCCGTAAAAGCTCTGGTGCTCAGAGAAGTTCACATATCATGGCATCGGAGCACAACCGAGTATCATCTGGAAGAAACACATCAAACATAAATAATTTGGATTCAACGCTTAGAGGTATTGAGAGTCTGCATTTAAACGATGAGAGGGCACAGTATTAG 1425 0.4204 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYEAKLYKILQGGTGIPNVKWSGVEGEYNILVMDLLGPSLEDLFNFCNRKLSLKTVLMLADQMINRVEFVHTKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKFRDSAHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQIATPPSRGIGLAAGPSSGLPLASANADGQSGGGKDGRNIGWSSSDPTRRRTSGPIANDGILSREKAPLTNDLTGSKDAMLSSSNFFRSSGSARRGAMLSSRDAAVGSETEPSSRPLTLDSSLGAVRKSSGAQRSSHIMASEHNRVSSGRNTSNINNLDSTLRGIESLHLNDERAQY* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0526 474 MobiDBLite consensus disorder prediction 423 452 - -
Mtr8g0526 474 CDD STKc_CK1_delta_epsilon 8 281 - -
Mtr8g0526 474 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr8g0526 474 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0526 474 SUPERFAMILY Protein kinase-like (PK-like) 5 289 IPR011009 -
Mtr8g0526 474 PANTHER CASEIN KINASE-RELATED 1 455 - -
Mtr8g0526 474 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 455 IPR030509 GO:0004672|GO:0005524
Mtr8g0526 474 SMART serkin_6 9 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0526 474 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Mtr8g0526 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr8g0526 474 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0526 474 MobiDBLite consensus disorder prediction 318 373 - -
Mtr8g0526 474 MobiDBLite consensus disorder prediction 334 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0526 Mtr-Chr8 6250585 6255892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0526 7 222 EF-hand Containing Proteins AT2G17890 25.893 1.39e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr8g0526 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0526 K02218 - gmx:100778165 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3476 2 48851762 48857166 Mtr8g0526 8 6250585 6255892 PCT