Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0525 ATGGCAAAGGGAAGGATCAGGGCGAGGCTCCGAAGGAGCAATTTTTACACATTTGGTTGTCTTCGAGCCTCTGCTACTACTGAGGAAGGGCCTCATCCACTTCAAGGTCCGGGGTACTCGCGAACCGTGCACTGCAACCAGCCTCAGATCCATGAGAAGAGACCTTTCTTTTATTGCAAGAATGATATTTCCACAACCAAATACAACGTTCTTACATTTTTGCCCAAGGCAATTTTTGAACAGTTTCGTAGGGTTGCTAATATATACTTTCTTTTGGCTGCGTGTCTCTCGTATACTCCAATGTCACCTTTTAGTGCATTGAGTATGATTGCTCCTTTAGCATTTGTTGTCGGGCTTAGTATGGCGAAGGAAGCATTGGAAGATTCCCGCAGGTTCGTTCAGGATGTTAAAGTTAATCGTCGAAAAGTTAATCACCATAAAGGTGATGGTGTTTTTGGTCATAGATCGTGGCAGAATATTATGGTTGGGGATGTAGTAAAAGTAGAAAAGGACAAGTTTTTTCCAGCTGATTTGCTTCTCCTATCATCAAGTTATGATGATGGGATATGCTATGTGGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTTAAAAGATCTTTGGAGTCTACCTTGGCCCTAGATAGTGATTTAGCTTTTAAGGATTTCACTGGAACAATAAGATGTGAAGACCCGAACCCCAGTCTTTACACTTTTGTTGGAAATTTTGAGTATGAGCGCCAGGTTTATCCTCTTGATCCTGGTCAAATTCTCCTCCGAGATTCTAAGCTCAGGAACACCGAATACATCTATGGAGTGGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCCACAAGATCCCCTTCAAAAAGGAGCACAATAGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATATTTATATCTGTCATTAGTACCATAGCATTTATTGTCATGACCAAGTACGGAACCCCAAATTGGTGGTACATACGCCCTGACGTAATCGACCGCCAGTATGATCCCAAGACACTTGGAATGGCTGGGATGAGTCATTTGATTACTGCTCTCATTCTCTATGGATATTTGATACCCATCTCACTTTATGTTTCCATCGAGGTTGTGAAGGTTTTACAGGCAACCTTCATTAACCAAGACATTCTAATGTATGATGAAGAAACCGGAACTCCAGCTGACGCACGGACTTCAAATTTGAATGAAGAGTTGGGTCAGGTGGATACAATCCTCTCTGATAAAACTGGAACTTTAACATGCAATCAGATGGACTTTTTGAAGTGCTCTATTGCGGGTACTCAATATGGTGCGTCTTCAAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATAGCTTCTGATCTCGAGGACGGGGATTCAGATCTCTCCAATTTCCCCCTACGTCATAGGAAAGCTCAGGTTTCATGGGAAAACATTGATAAAGTTGATGAAATTGAACTAGAGACTGTTGTTACTTCCAAAGGTGATGAGGATCAAAAGCATGCCATAAAGGGGTTTGGTTTTGAAGACGACCGTCTCATGAATTGTAATTGGTTGCAAGAGCCCAATGTCGATGACATTTTATTATTTTTCCGAATACTAGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACAGGTGGTTTTACATATGAAGCCGAGTCTCCAGATGAAGGGTCTTTTCTCGTAGCTGCAAGAGAATTTGGCTTTGAGTTTTGTAGGAGGACCCAGTCAAGTATTTTCACACGTGAAAGAATATCTGCTTCAGGGCAAGTGGTTGAAAGGGAGTACAAACTCTTGAATCTACTAGATTTCACAAGTAAAAGAAAGCGTATGTCAGTGATTGTCCGTGATGAGGAGGGCCAAATTTTTCTTCTGTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCCAAGAACGGAAAAGCGTATTTGGAGGCTACTACCAAGCATTTAAATGATTATGGAGAAACAGGTTTAAGGACACTAGCTCTGTCCTATAGAAGGCTTGAAGAAAAAGAGTACTCGGATTGGAACAATGAGTTTCAGAAAGCCAAAGCAGCCGTTGGGGCTGACAGAGAGGCAATGCTTGAGCGGGTCTCAGATATTATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTATAGAAGACAAACTGCAGAAAGGGGTTCCCCAGTGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATTTGGGTATTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGCTTTTCCTGTAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACAAATTCAGACTCAGTATCCAATGATACCAAACAGTTCTTTTGCTTAACTCCGCAGGCCATTAAGGACAACATATTAAATCAAATTACCAATGCTACACAAATGATAAAGCTGGAGAAGGATCCTCATGCAGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAAGATGATGTAAAGCTCCAATTTTTGGGACTAGCAGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTCGTAAGGTTGGTAAAACAAGGAACTGGGAAGACCACTCTTGCAATAGGTGATGGTGCAAATGATGTTGGCATGATACAAGAAGCAGATATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGCGACTTCTCGATTGCCCAATTTCGATTTTTGGAGCGGCTTCTGGTGGTCCATGGACACTGGTGTTATAAGAGAATTGCACAGATGATTTGTTATTTCTTTTACAAGAATATAGCATTTGGCCTCACCATCTTTTACTTTGAGGCCTATACAGGCTTCTCCGGCCAATCGGTTTATGACGACTGGTACATGATATTGTTCAACGTTTGTTTGACATCATTACCCGTCATTTCACTTGGTGTATTTGAACAAGATGTTTCATCGGAAGTTTGTTTACAGTTTCCAGCACTTTACCAACAAGGACCCAAAAATCTGTTCTTTGATTGGTATAGAATATTAGGATGGATGGCCAATGGTCTATATTCCTCTGTCGTCATCTTCTTCGGCACCGTCCTCATATTCTATGAGCAAGCATTCCGTGTTGATGGTCAGACATCTGACTTGGCTTCTCTTGGAACCACAATGTTCACTTGCATAATCTGGGCAGTCAACTGTCAAATTTCACTGACAATGAGCCATTTTACATGGATTCAACATCTGTTTATATGGGGTAGCATAGTTACTTGGTACCTCTTTCTCATGATGTATGGCGCACTTTCTCCCAACCTTTCTCACAGTGCCTACCATTTACTGATTGAGGCTCTCGGACCTGCGCCTATTTATTGGGCAACAACATTATTAGCTACAGTTGCATGCATTCTTCCTTATCTTGTCCACATATCATTTCAAAGATGTTTTAGTCCAATGGATCACCACATTATCCAAGAAATCAAGCACTACAAGAAAGATATTGAGGATCAATCCATGTGGGTGAGGGAGAGTTCTAAAGCAAGACAAGAAACCAAGATTGGGTTCACTGCAAGAGTGGAAGCAAAGATCAGACAATTGAAGGGAAAGCTGCATAAAAAACAATCTTTCTTGAATATTTTGTCCCCAGTACGTACATAA 3702 0.4168 MAKGRIRARLRRSNFYTFGCLRASATTEEGPHPLQGPGYSRTVHCNQPQIHEKRPFFYCKNDISTTKYNVLTFLPKAIFEQFRRVANIYFLLAACLSYTPMSPFSALSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNHHKGDGVFGHRSWQNIMVGDVVKVEKDKFFPADLLLLSSSYDDGICYVETMNLDGETNLKVKRSLESTLALDSDLAFKDFTGTIRCEDPNPSLYTFVGNFEYERQVYPLDPGQILLRDSKLRNTEYIYGVVIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLIFISVISTIAFIVMTKYGTPNWWYIRPDVIDRQYDPKTLGMAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDILMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTQYGASSSEVELAAAKQIASDLEDGDSDLSNFPLRHRKAQVSWENIDKVDEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLQEPNVDDILLFFRILAVCHTAIPELNEETGGFTYEAESPDEGSFLVAAREFGFEFCRRTQSSIFTRERISASGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGQIFLLCKGADSIIFDRLSKNGKAYLEATTKHLNDYGETGLRTLALSYRRLEEKEYSDWNNEFQKAKAAVGADREAMLERVSDIMEKELILVGATAIEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTNSDSVSNDTKQFFCLTPQAIKDNILNQITNATQMIKLEKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVDCASVICCRVSPKQKALVVRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAYTGFSGQSVYDDWYMILFNVCLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMANGLYSSVVIFFGTVLIFYEQAFRVDGQTSDLASLGTTMFTCIIWAVNCQISLTMSHFTWIQHLFIWGSIVTWYLFLMMYGALSPNLSHSAYHLLIEALGPAPIYWATTLLATVACILPYLVHISFQRCFSPMDHHIIQEIKHYKKDIEDQSMWVRESSKARQETKIGFTARVEAKIRQLKGKLHKKQSFLNILSPVRT* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0525 1233 SFLD C1.7: P-type atpase like 406 939 - -
Mtr8g0525 1233 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Mtr8g0525 1233 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1229 - -
Mtr8g0525 1233 SUPERFAMILY HAD-like 411 932 IPR036412 -
Mtr8g0525 1233 SUPERFAMILY Calcium ATPase, transduction domain A 147 287 IPR008250 -
Mtr8g0525 1233 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 860 969 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g0525 1233 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Mtr8g0525 1233 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Mtr8g0525 1233 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 524 689 IPR023299 GO:0000166
Mtr8g0525 1233 Pfam Cation transport ATPase (P-type) 547 652 - -
Mtr8g0525 1233 Gene3D - 420 432 IPR023214 -
Mtr8g0525 1233 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr8g0525 1233 Gene3D - 433 455 IPR023299 GO:0000166
Mtr8g0525 1233 SFLD p-type atpase 406 939 IPR044492 -
Mtr8g0525 1233 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1229 - -
Mtr8g0525 1233 Gene3D - 597 702 IPR023299 GO:0000166
Mtr8g0525 1233 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1163 IPR023298 -
Mtr8g0525 1233 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Mtr8g0525 1233 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Mtr8g0525 1233 Gene3D - 721 928 IPR023214 -
Mtr8g0525 1233 CDD P-type_ATPase_APLT_Dnf-like 61 1048 - -
Mtr8g0525 1233 Gene3D - 113 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0525 Mtr-Chr8 6241437 6248221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0525 1 1229 Primary Pumps ATPases AT1G17500 73.333 0.0 1895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0525 K01530 - gmx:100784621 2146.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3477 2 48860821 48868240 Mtr8g0525 8 6241437 6248221 PCT