Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0523 ATGCGTATCTCTCACAAAAAGTACGATGTATTCATTAGCTTTAGGGGAGAGGATACACGTACAAACTTCACTGCCCAGCTTCATCAAGCTCTTAGCGATAGAAGTATCGAATCATACATTGATTACAATCTTGTTAAAGGTGATGAGGTTGGACCTGCTCTTACCAAAGCAATTGATGACTCACATATGTCTCTTGTAGTTTTCTCAAAAGACTATGCAACTTCAAAGTGGTGCTTGGATGAACTCGTCCACATACTTCAATGCAGAAAACTTAATGGACATGTAGTTATACCTGTGTTCTATAACATAGATCCATCACATGTACGTCATCAGAAGGAGAGTTACCAGATGGCATTTGCAAGATTTGAGAGAGAACTTGCCCACAGTAAATCTCATGTAGACAAAGTGTCTGAGTGGAAAGCTGCTCTCAATTTGGCTGCCAATATATCTGGATGGGACTCTCGCAAATATCGAGATGATACTCAAGTCATTGGCAATATTGTGGAAGATGTTTTGCAGAAGTTGGCCCTCATGTACCCTAATGAACTGAAAGATATTGTTAAAGTTGATGAGAACAGTGAACATATTGAATTATTATTGAAAACAATACCAAGAATTGGAATTTGGGGCATGAGTGGAATAGGAAAGACAACCATAGCAAAACAGATGTTTTCCAAGAACTTTGCCCATTATGACAATGTATGCTTCTTGGAAAAGATAAGCGAAGACTCGGAAAAGTTTGGACCAATATATGTTTGTAATCAGCTTCTTCGTGAGCTACTGAAGCGAGAAATTACAGCGTCTGATGTTCACGGACTTCACACATTCATCACGAGGAGGCTCTTTCGCAAAAAAGTTTTCATTGTTCTTGATGATGTTAATAATACGACACAGTTAGATGATTTGTGTCGCGTACTTGGTGACCTTGGACCTAACAGTAGACTCATTATAACAACGCGAGACAGGCATACACTTGGTGGAAAAGTTGATGAGATATATGAGGTCAAAACATGGAAGCTTAGAGACTCTCTAAAGCTTTTTAGCTTAAGAGCCTTCAAGCAAGACCATCCTTTAAAAGGTTACGAGCGTGTCTCTGAAAGGGCAGTTGAATGTGCAGGAGGTGTTCCATTAGCTTTAGAAGTTTTGGGTTCACATTTTCATTCCAGAAAACAAGAATTCTGGGAATCCGAGTTAAATTTGTATGAGAACAAAGGAGAAGCCTTCCCCGATATTCAAAAAGTGCTAAGAACAAGTTATAATGGATTATCATGGCGACAGAAGGAAATGTTTCTAGACATTGCATTCTTTTTCAAAGGTGAAAACAAAGATATCGTCACAAGGATACTAGATGCCTTTGGTTTCAATGCAACTAGTGGGATAGAAATCCTCGAAGATAAAACTCTTATAACCATCTCAAACAACGACAGAATACAAATGCACGACTTACTACAAAAGATGGCCTTTGATATAGTAAGAGAAGAATATAATGACCGAGGAAAGCGTAGCCGACTGAGGGATGCTAAAGACATTTGCGATGTACTTGGAAATAACAAGGGGAGTGATGCAATTGAAGGAATAATATTTGATTTGTCTCAAAAAGTAGATATACATGTTCAAGCTGACGCATTCAAATTGATGCATAAATTAAGATTCCTTAAATTCCACATCCCCAAGGGTAAGAAGAAATTGGGCACTGTGCATCTTCCTGAAAATATTATGCCATTTTTTGACAAATTGAAATACCTTGAGTGA 1752 0.3818 MRISHKKYDVFISFRGEDTRTNFTAQLHQALSDRSIESYIDYNLVKGDEVGPALTKAIDDSHMSLVVFSKDYATSKWCLDELVHILQCRKLNGHVVIPVFYNIDPSHVRHQKESYQMAFARFERELAHSKSHVDKVSEWKAALNLAANISGWDSRKYRDDTQVIGNIVEDVLQKLALMYPNELKDIVKVDENSEHIELLLKTIPRIGIWGMSGIGKTTIAKQMFSKNFAHYDNVCFLEKISEDSEKFGPIYVCNQLLRELLKREITASDVHGLHTFITRRLFRKKVFIVLDDVNNTTQLDDLCRVLGDLGPNSRLIITTRDRHTLGGKVDEIYEVKTWKLRDSLKLFSLRAFKQDHPLKGYERVSERAVECAGGVPLALEVLGSHFHSRKQEFWESELNLYENKGEAFPDIQKVLRTSYNGLSWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITISNNDRIQMHDLLQKMAFDIVREEYNDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFDLSQKVDIHVQADAFKLMHKLRFLKFHIPKGKKKLGTVHLPENIMPFFDKLKYLE* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0523 583 Gene3D - 339 423 IPR042197 -
Mtr8g0523 583 Gene3D - 176 331 IPR027417 -
Mtr8g0523 583 PRINTS Disease resistance protein signature 205 220 - -
Mtr8g0523 583 PRINTS Disease resistance protein signature 280 294 - -
Mtr8g0523 583 PRINTS Disease resistance protein signature 372 386 - -
Mtr8g0523 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 433 IPR027417 -
Mtr8g0523 583 Pfam NB-ARC domain 206 391 IPR002182 GO:0043531
Mtr8g0523 583 Pfam TIR domain 7 181 IPR000157 GO:0007165
Mtr8g0523 583 SUPERFAMILY "Winged helix" DNA-binding domain 410 514 IPR036390 -
Mtr8g0523 583 Gene3D - 3 175 IPR035897 -
Mtr8g0523 583 PANTHER NB-ARC DOMAIN PROTEIN 6 583 - -
Mtr8g0523 583 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 583 IPR044974 GO:0006952
Mtr8g0523 583 SMART till_3 7 149 IPR000157 GO:0007165
Mtr8g0523 583 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Mtr8g0523 583 ProSiteProfiles TIR domain profile. 6 175 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0523 Mtr-Chr8 6222322 6226278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0523 4 582 WRKY Transcription Factor Family AT4G12020 30.523 1.36e-58 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0523 - - mtr:MTR_8g018270 1134.78