Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0518 ATGTTAACCTCTACCAGAAAAAAATATGATGTATTCATTAGCTTTAGGGGTGAAGACACAAGGAAAAATTTCACAGGAAAGCTTCATGAAGCTCTTAAAAAGGAAAATATTGAAACATATATTGATTTATATGTTAAAGTGGGAGATGAGGTTGGACCAATGCTTATCCAAGCAATCCATGAGTCACAAATATCTGTCATTGTTTTCTCAAAAAACTTTGTAACCTCAAAGTGGTGTTTGGAGGAACTCCTTCATATACTAGAATGTAGAAAACATCATGGACAAGTAGTTTTACCTTTTTACTATGAAACCGATCCATCAAATATTGTAGGTCTTGGGAAAGGAAGTTATGAGAAAGCATTTGCAAGATATGAGAGAGAGCTCATGAACAATCAATGTGATGATCTCACGAATCCCGGAAAAGTGTCCAAGTGGAAAGCTGCTCTTGTGGAGGTTGCTGCTATATCCGCACGGGACTCTCGCCACTATAGTGATGATTCTCAATTCATTCAATGTATTGTGAAAGACGTTTTACAAACACTATCCCGGTTGTATCCTAATGAACTAAGAGATCTCATTCAAATTGATGAAAAAGGTGAAGAAGTTGAGAATTATCTTAAAAAGGTTCCAAGAATTGGAATTTGGGGTATGGATGGATTAGGAAAAACAACCATAGCAAGACAAATGTTTTCGAAGCACTTCATGCATTTTGACAGTTCATGCTTCTTAGAAAGCATAAGCCAAGGGTTAAAAGAATTTGGACTTCCCTATCTACGTGATAAGCTTCTCAATGATCTACTAAAGCAAAAAATTATTACATCTGATTTTCATGGAATTAGTGGTAAAAGAGTTTTCATTGTACTTGATGATGTTGATAATGGTATGCAATTAGATTATTTGTGTGGAGAACTCAATGATCTTGCACCAAATAGTAGAATCATTATCACAACAAAAAATAGGGATACTCTTAATGGAAGAGTTGATGAGATATATGAGGTCGAAAAATGGAAGTTCAAAGAATCTCTAGAACTTTTTTGCTTGGCAGCCTTCAAGCAAAAGCATCCTAAAGTGGGTTATGAGCGTCTCTCTGAAAGGGCAGTTGCGTGTGCACGAGGTGTTCCCTTAGCTTTAAAAGTTTTGGGTTCGCATTTACATTCTAGAAATCTCGAATTTTGGGAATTTGAATTGAACTATTTGGATAGCAAAGGAGAATCGTTGTGCGAAATACAAGATATGTTGAGAGTGAGCTATAATGGATTAAAAGCGCCAGAGAAAGAAATGTTTCTAGACATTGCATTCTTTTTCAAAGATGAAAATAAAGATTTTGTTACAAGTATACTAGATGCTTGTGGCTTTGATGCTACTAGTGGAATACATATCCTTAAAGATAAAGCTCTTATCACCATTTCAAATGACAACAAAATACAAATGCATGACTTGCACCAAAAACTGGCTTTTGATATAGTTCAATACAAAAAAGATCAAAGAAGAAGAGACCCACGGAAATGTAGCCGATTGAGGGACATTGAAGAAGTTTGTGGTTTACTCAAAAATAACAAGGGGACTCATAATAAAATTGAAGGTATAACATTTGATCTTACTCAAAAAGTAGACTTGCACATCCAAGATGACACATTCAACTTGATCACTAAACTAAGATTTCTTAGACTACATGTCCCATTGGGTAAGAAGAGATTGACTAACTTGTATCATCCTGATCAAGGCATAATGCCATTTTGTGATAAATTGAGATATCTTGAGTGGTATGGATACCCTTCTAAGTCTCTTCCACAACCTTTTTGTGCCGAGCTTCTTGTTGAGATTCGCTTGCCGCATAGCCATGTAGAACATCTATGGTATGGGATTCAGGAGCTTGTGAATTTAGAGGGAATTGACTTAACTGAATGCAAACAATTGGTGGAGCTCCCTGATTTATCTAAGGCAACACGACTTAAATGGTTGTTTCTATCTGGTTGTGAAAGTTTATCTGAAGTTCATCCATCAACTTTTCATAACGACACACTTGTTACTTTGCTACTAGATAGGTGCAAGAAATTGGAAAATCTTGTATGCGAGAAGCATTTAACATCTCTAAAGAATATTGATGTTAATGGCTGCTCAAGTCTCATTGAATTTTCTTTGTCCTCTGATTCAATTGAAGGATTGGATTTAAGCAACACAATGGTCAAAACATTGCACCCATCAATTGGTCGTATGAGCAATTTTTCATGGCTTAATCTACAAGGTTTAAGGCTGCAAAATGTGCCAAAAGAATTGTCTCACTTGAGATCATTAACTCAGCTTTGGATTTCCAATTGCAGTGTGGTAACAAAATCAAAGTTGGAAGAGATATTTGAGTGTCATAATGGTTTGGAATCATTATTAAAAACATTGGTCTTGAAAGATTGTTGCAACTTGTTTGAGCTTCCCACGAACATCGATTCATTATCATTTTTGTATGAATTAAGACTAGATGGAAGCAATGTGAAGATGTTACCTACAAACATCAAGTATCTTTCAAACCTAACAATTTTATCCTTAAACAATTGTAAAATGCTTGTTTCTTTGCCACAGCTTCCTGAACACATCAAAGAACTTCGTGCTGAAAATTGCACCTCATTGGTCGAAGTATCAACTTTGAAGACTATGTCAAAACATAGGAACGGAGATGAGAAATATATTTCATTCAAGAATGGAAAAATGTTGGAATCAAATGAACTTTCACTCAACCGCATCACGGAAGACACAATACTAGTAATAAAGAGTGTTGCATTGTACAATGTACTAGTAGATAAACGTTGTTCCGAAATTCATAGCTACAATTATGATAGTGTTGTGGTATGTTTACCAGGAAGTAGAATTCCAAGCCAGCTCAAATACAAAACATCAGATTCCAAACTAACTATTGGATTTTCGGACATATATTACTCGTTGGGATTCATTTTCGCAGTGGTTGTTTCTCCATCCAGTGGAATGAAGAATGAGCGTGGCAGCGGTGCTAAAATTCAATGCAAATGTTATAGGGAAGATGGCAGTCAGGTGGGAGTTTCTTCCGAGTGGCATAATGAAGTTATAACAAATTTGGATATGGATCATGTTTTTGTATGGTATGATCCATACCGTATTGGGATCATACAATACATCAGTGAAGGAAATGTTTCTTTTGAATTCAATGTTACAAATGATAGTGAGGAACAAGATTGTTTTCTCAGTGTGAAAGGGTGTGGAATATGCCCAATATATACCTCAGAATTTTTGAGTCTTTTAGACATGTTGCATTTAGACAAGGATGTAGAATCATGTATGCGTAGGAATATTCAGTGTTGA 3327 0.3565 MLTSTRKKYDVFISFRGEDTRKNFTGKLHEALKKENIETYIDLYVKVGDEVGPMLIQAIHESQISVIVFSKNFVTSKWCLEELLHILECRKHHGQVVLPFYYETDPSNIVGLGKGSYEKAFARYERELMNNQCDDLTNPGKVSKWKAALVEVAAISARDSRHYSDDSQFIQCIVKDVLQTLSRLYPNELRDLIQIDEKGEEVENYLKKVPRIGIWGMDGLGKTTIARQMFSKHFMHFDSSCFLESISQGLKEFGLPYLRDKLLNDLLKQKIITSDFHGISGKRVFIVLDDVDNGMQLDYLCGELNDLAPNSRIIITTKNRDTLNGRVDEIYEVEKWKFKESLELFCLAAFKQKHPKVGYERLSERAVACARGVPLALKVLGSHLHSRNLEFWEFELNYLDSKGESLCEIQDMLRVSYNGLKAPEKEMFLDIAFFFKDENKDFVTSILDACGFDATSGIHILKDKALITISNDNKIQMHDLHQKLAFDIVQYKKDQRRRDPRKCSRLRDIEEVCGLLKNNKGTHNKIEGITFDLTQKVDLHIQDDTFNLITKLRFLRLHVPLGKKRLTNLYHPDQGIMPFCDKLRYLEWYGYPSKSLPQPFCAELLVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELPDLSKATRLKWLFLSGCESLSEVHPSTFHNDTLVTLLLDRCKKLENLVCEKHLTSLKNIDVNGCSSLIEFSLSSDSIEGLDLSNTMVKTLHPSIGRMSNFSWLNLQGLRLQNVPKELSHLRSLTQLWISNCSVVTKSKLEEIFECHNGLESLLKTLVLKDCCNLFELPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKELRAENCTSLVEVSTLKTMSKHRNGDEKYISFKNGKMLESNELSLNRITEDTILVIKSVALYNVLVDKRCSEIHSYNYDSVVVCLPGSRIPSQLKYKTSDSKLTIGFSDIYYSLGFIFAVVVSPSSGMKNERGSGAKIQCKCYREDGSQVGVSSEWHNEVITNLDMDHVFVWYDPYRIGIIQYISEGNVSFEFNVTNDSEEQDCFLSVKGCGICPIYTSEFLSLLDMLHLDKDVESCMRRNIQC* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0518 1108 Gene3D - 179 330 IPR027417 -
Mtr8g0518 1108 ProSiteProfiles TIR domain profile. 7 181 IPR000157 GO:0007165
Mtr8g0518 1108 Gene3D - 5 178 IPR035897 -
Mtr8g0518 1108 PANTHER NB-ARC DOMAIN PROTEIN 7 964 - -
Mtr8g0518 1108 PANTHER NB-ARC DOMAIN PROTEIN 1013 1077 - -
Mtr8g0518 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 431 IPR027417 -
Mtr8g0518 1108 Gene3D - 337 421 IPR042197 -
Mtr8g0518 1108 Gene3D Ribonuclease Inhibitor 717 910 IPR032675 -
Mtr8g0518 1108 Gene3D Ribonuclease Inhibitor 471 716 IPR032675 -
Mtr8g0518 1108 SUPERFAMILY L domain-like 531 878 - -
Mtr8g0518 1108 SUPERFAMILY "Winged helix" DNA-binding domain 408 493 IPR036390 -
Mtr8g0518 1108 PRINTS Disease resistance protein signature 211 226 - -
Mtr8g0518 1108 PRINTS Disease resistance protein signature 278 292 - -
Mtr8g0518 1108 PRINTS Disease resistance protein signature 370 384 - -
Mtr8g0518 1108 PRINTS Disease resistance protein signature 693 709 - -
Mtr8g0518 1108 Pfam NB-ARC domain 212 405 IPR002182 GO:0043531
Mtr8g0518 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1013 1077 IPR044974 GO:0006952
Mtr8g0518 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 964 IPR044974 GO:0006952
Mtr8g0518 1108 Pfam TIR domain 8 187 IPR000157 GO:0007165
Mtr8g0518 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Mtr8g0518 1108 SMART till_3 8 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0518 Mtr-Chr8 6159638 6163771 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0518 4 842 WRKY Transcription Factor Family AT4G12020 29.480 4.71e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0518 - - cam:101489032 1241.48