Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0515 ATGTCTTATTCCAGCAAGAAATACGATGTCTTTGTCAGCTTTAGAGGCGAGGACACTCGGTATGGCATCACCAACCTTATTTACGATGCTCTGATTCATAAATCAATAAAAACATTCATAGATTACGAGCTCAATAGAGGAGAAGATGTTTGGCCAAAACTTTCCAAAGCTATTGAAGAGTCACACATCTCCGTCGTTGTTTTCTCTGAAAATTTTGCAACCTCAAAATGGTGTTTGGAAGAACTGGTGAAAGTGCTGGAATGCAGAAAAGACCATGGTCAAGTTGTTATACCTGTTTTCTATAAAACAAATCCGTCTCACATAAGAAATCAGACTCATAGTTATGAGAAAGCATTTGCAAAACACGAGAGAGATCTTGGGACCAAAAGTAATGCATCCAATAAACTTATAGTGCTTAAGTGGAGATCTGCCCTTACTGAAGCAGCCACTATATCTGGATGGGACACTCATACTCACAAGGATGAATCTAACCTCATCCACAAAATTGTGAATGATGTATTGCAAAAGCTACAACTGAGGTACCCTAATGAACTAGAAGGCGTTGTGAGAGACGAAAAAAACTGTGAATGTGTGGAGTCATTATTGAAAAGTGTTCAAATACTTGGAATTTGGGGCATGGGCGGTATGGGAAAGACAACCATCGCCAAAGTCTTGTTTGCCAAACACTTTGCTCAATATGACCAAGTTTGCTTTGCTAATGCAAAAGAATATTCAGTCAGTAAGTTATTCTCTGAGCTACTAAAGGAAGAATTTTCTCCATCTGATGTTGTAATATCTACATTTCATATGAGAAGGCTGAGAAGTACCAAAGTTTTGATTGTACTTGATAATGTGGACAGTTTGGATCAATTTGAATATTTATGTAGAGATTATGGTAAGCTACATAAAGATAGTAGACTCATTATAACAACAAGAGACAGACAATTGCTGAGAAAACGAGTTCATCGGATATATGAGGTCAAGCAATGGGAAGATCCAAAATCTCTAGAGCTTTTCTGCCTTGAAGCTTTCGTGCCAAGTCATCCCCGAGAGAAGTATGAGCATCTCTTGCAAAGGGCGGTCACTTATGCAGGGGGCGTTCCACTGGCCCTTAAAGTTTTTGCTTTACTTCTTCGTTCAAGAGAGATTGAATTTTGGGAGAGTGCTTTTAAGAAACTTGGTAAGCATTCTAATGCGACAGTGCATGAAGTTTTAAAATTGAGCTATGATGACTTAGATGCACTGCAGAAGAAGATATTTCTAGACATAGCATTCTTTTTCATAGGAGAAAAGAAAGATTGTGTTGCGAGGATACTAGATGCTTGTGATTTCGAAGCAAGTAGTGAAATAGTAGTCCTCAAAGACATGGCTTTGATAACTATCTCAAATGACCATACAATTCAAATGCACGATTTGCTACAAAAAATGGGTTCGGACATATGCAATGATCGTGGCACGGACCCTGCAACACATACCCGACTGAGTGGAAGAGAAGCTCTTGATGTAATTGAAGAAAACAAGGGGAGTAGCTTCATTGAAGGCATAATGTTGGATTTGTCTCAAAATAATGATTTATCTTTAAGTGCCGACACATTCAGCAAGATGAAAGGCTTAAGAATTCTTAAATTCTATGCACCCTCTAACCAGAGTTGTACTACTACATACCTCGACCTTCCCGAATTTCTTGAGCCATTTTCAAATAAACTCAGGTATTTTGAATGGAATGGATACCCTTTTGAGTCTCTTCCAAAACCTTTTAAGGCTAAGTTTCTTGTTGAGATCCGCATGCGGTACAGCATTGTTAAAGAACTCTGGCAAGGGATACAGGAATTTGATAAATTAGAGGGAATTGACATGAGTGAATGCAAGCATTTTGTACAGCTTCCAGATTTGTCTAAGGCGTCAAGACTTAAATGGATTAATCTCTCTGGTTGTGAGAGTCTGGTTGATCTTCATCCGTCTGTTTTATGTGCAAACACACTTGTTACTTTGATACTGGATAGGTGTACAAAGGTTAGAAGCGTTAGAGGTGAAAAACATTTAAGTTTTTTGGAGGAGATCAGTGTGGATGGGTGCACAAGTTTGGAGGAATTTGCAGTGTCCTCGGATTTAATTGAAAACTTGGATTTAAGCAGTACAGGAATCCAAACACTGGACCTATCAATTGGTTGTCTTCCCAAAATTAAACGACTTAATCTAGAGAGTTTAAGACTCAGCCATCTTCCAAAGGAGTTACCTAGTGTGATATCTCTAAGGGAGTTGAAGATTTCTGGCAGTAGACTAATAGTTGAGAAACAACAGCTACATGAGCTGTTTGATGGCTTACGATCCCTACGAATACTACATATGAAGGATTTTGTTTTTGTAAACCAGTTTGACCTCCCCAACAACATCGACGTTGTATCAAAGTTAATGGAATTAAACCTTGATGGAAGCAACATGAAGAGGTTGCCTGAAAGCATTAAAAAGCTTGAAGAATTGGAAATTTTGTCTTTGGTGAATTGCAGGGAGCTTGAGTGCATACCAGAGCTTCCACCTCTCATCACAGTGTTAAATGCAGTTAACTGCACATCACTCATTTCAGTGTCAAGTCTAAAAAATTTAGCAACAAAGATGATGGGAAAAACCAAACACATTTCATTCAGTAACAGCTTGAATTTGGATGGACATTCACTTACCCTTATAATGAAAAGTCTCAATTTAACAATGATGAGTGCTGTGTTTCAAAATGTGTCTGTAAGAAGACTTCGTGTGGCCGTTCACAGCTACAATTATACCAGTGTTGATACTTGTGAACCAGGAACATGTATCCCGAGTCTGTTGCAATGTCAAATAGCTACTGACTCCTCCATTACCTTTAATTTGCTTCCTGATCATTCCAACCTGCTAGGATTCATATACTCAGTGGTTCTTTCTCCAGCTGGTGGAGATGGAACGAAGAAGGGTGAAGCTAGAATAAAATGTCAATGCAACTTGGGAGAACAAGGTATAAAGGTTAGCTTGCTAAATACTGATTGCACAGAACTGAACTCGGATCATGTTTATGTGTGGTATGATCCATTCCATTGTGACAGCATTCTCAAATTTGATAAACCTGAGATTTGTTTTGAGTTCTGTGTTACAAACGATATGGGGGAAGTTGACGGTTCAATTGGTATTAAAGAGTGCGGGGTACGACTTGTAGGTGTCGAAGACTTGGAGAGTGTTTTACTGGAATTGGAATTGGATTCACCAAGGAAAGAAGAGTTGAAGAAGGCAGTTGAATTAGAATCAGGACATAGTATAATCTTTAAGCCACTTGAAGATCTTTCCACAAATATCACACAAGTCCCCTCCCACTCTGAATTAAGTTACACATGTGGTCATGAGGAGTCAGCATGCGGTGAGGAGTCAAGCAGTGGCCAAGGTACCCAGGTACAAAACCAAGAGTTGGCCTTGAACAAAAAATGCGACTTTTCATGTGACTTCTTAATACGTCCATTGAAGTACTTGTGGAGATTGATTTGCAGCTGA 3513 0.3903 MSYSSKKYDVFVSFRGEDTRYGITNLIYDALIHKSIKTFIDYELNRGEDVWPKLSKAIEESHISVVVFSENFATSKWCLEELVKVLECRKDHGQVVIPVFYKTNPSHIRNQTHSYEKAFAKHERDLGTKSNASNKLIVLKWRSALTEAATISGWDTHTHKDESNLIHKIVNDVLQKLQLRYPNELEGVVRDEKNCECVESLLKSVQILGIWGMGGMGKTTIAKVLFAKHFAQYDQVCFANAKEYSVSKLFSELLKEEFSPSDVVISTFHMRRLRSTKVLIVLDNVDSLDQFEYLCRDYGKLHKDSRLIITTRDRQLLRKRVHRIYEVKQWEDPKSLELFCLEAFVPSHPREKYEHLLQRAVTYAGGVPLALKVFALLLRSREIEFWESAFKKLGKHSNATVHEVLKLSYDDLDALQKKIFLDIAFFFIGEKKDCVARILDACDFEASSEIVVLKDMALITISNDHTIQMHDLLQKMGSDICNDRGTDPATHTRLSGREALDVIEENKGSSFIEGIMLDLSQNNDLSLSADTFSKMKGLRILKFYAPSNQSCTTTYLDLPEFLEPFSNKLRYFEWNGYPFESLPKPFKAKFLVEIRMRYSIVKELWQGIQEFDKLEGIDMSECKHFVQLPDLSKASRLKWINLSGCESLVDLHPSVLCANTLVTLILDRCTKVRSVRGEKHLSFLEEISVDGCTSLEEFAVSSDLIENLDLSSTGIQTLDLSIGCLPKIKRLNLESLRLSHLPKELPSVISLRELKISGSRLIVEKQQLHELFDGLRSLRILHMKDFVFVNQFDLPNNIDVVSKLMELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLITVLNAVNCTSLISVSSLKNLATKMMGKTKHISFSNSLNLDGHSLTLIMKSLNLTMMSAVFQNVSVRRLRVAVHSYNYTSVDTCEPGTCIPSLLQCQIATDSSITFNLLPDHSNLLGFIYSVVLSPAGGDGTKKGEARIKCQCNLGEQGIKVSLLNTDCTELNSDHVYVWYDPFHCDSILKFDKPEICFEFCVTNDMGEVDGSIGIKECGVRLVGVEDLESVLLELELDSPRKEELKKAVELESGHSIIFKPLEDLSTNITQVPSHSELSYTCGHEESACGEESSSGQGTQVQNQELALNKKCDFSCDFLIRPLKYLWRLICS* 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0515 1170 Gene3D - 4 174 IPR035897 -
Mtr8g0515 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Mtr8g0515 1170 Pfam NB-ARC domain 201 411 IPR002182 GO:0043531
Mtr8g0515 1170 Gene3D - 331 413 IPR042197 -
Mtr8g0515 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 423 IPR027417 -
Mtr8g0515 1170 PANTHER NB-ARC DOMAIN PROTEIN 6 946 - -
Mtr8g0515 1170 SMART till_3 7 151 IPR000157 GO:0007165
Mtr8g0515 1170 SUPERFAMILY "Winged helix" DNA-binding domain 401 484 IPR036390 -
Mtr8g0515 1170 Pfam TIR domain 7 183 IPR000157 GO:0007165
Mtr8g0515 1170 PRINTS Disease resistance protein signature 207 222 - -
Mtr8g0515 1170 PRINTS Disease resistance protein signature 272 286 - -
Mtr8g0515 1170 PRINTS Disease resistance protein signature 364 378 - -
Mtr8g0515 1170 PRINTS Disease resistance protein signature 822 838 - -
Mtr8g0515 1170 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Mtr8g0515 1170 SUPERFAMILY L domain-like 516 881 - -
Mtr8g0515 1170 Gene3D Ribonuclease Inhibitor 704 900 IPR032675 -
Mtr8g0515 1170 Gene3D Ribonuclease Inhibitor 486 703 IPR032675 -
Mtr8g0515 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 946 IPR044974 GO:0006952
Mtr8g0515 1170 Gene3D - 175 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0515 Mtr-Chr8 6103146 6111834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0515 4 807 WRKY Transcription Factor Family AT4G12020 29.356 8.65e-73 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0515 - - mtr:MTR_8g018040 2290.38