Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0513 ATGTCCACCTCTTCGAAAAAGTACGATGTGTTCATCAGTTTCAGGGGCCAAGACACGCGTGAAACATTCACAAGCCATCTTCATTATGCTTTATGCAAGGAAAATATCATAACATACATTGATGATAATCTTGTGAAGGGAGATGAAATTGGTGAAGCACTTGCTGAAGCAATCCAAGACTCACGCATATCTCTTGTTGTATTCTCCAAAAATTATGCAACCTCAAAGTGGTGCTTGAATGAACTCCTCAAAATACTTGAATGCAAAAAACTTCATGGTCAAGTTGTTATACCTGTGTTCTATAACACAGGTACATCAGAAGTACGTAATCAAACAGGGAGTTACGAGAAACCGTTCTCACACTATGAGATAGAAGCCATCAACAACGAATCCTTTGCAAACACTGTTTCTGAGTGGAGAGCTGCTCTTGCGGAGGCTGCAAATATACCTGGATGGGATAGTCAAAGTCGAACCTATAAGGATGACTCTCAAGTCATTCAGAGCATTGTCAGTGATGTTTGGAAAAAGCTAGCCTTGATGTATCCTAATGAACTGAAAGGCCTTGTTCATAACGATCAACACGGTAGTTATACTGAGTCACTGCTGAAAAGATATTCAAGAATTGGAATTTGGGGCATGGGTGGAATAGGGAAGACAACCATAGCCAGACAGATGTTTGCAAAGCACTTTGCACAATATGAAAGCGCTTGCTTTATGGAAAATGTAAGTGAAGAAATAGAAAAGTTTGGACCAAGGTACATCCGTAATAAGCTTCTTAGTGAGCTGCTTAAGCGACAAATTACTGCATCGGATATTCTTGGAGCCCCATTCATTGAGAGAATCTTAAGTGGTAGAAAATTTTTCATTGTACTTGATGATGTGGATAATGCTGCACAATTAGAATATTTGTGCTCAGAACTTGATGACCTTGGACCAAACAGTAGGCTAATTATCACGGGAAGAGATAGGCAAACACTCAAGGGAAAAGTTGATGTGATTCATGAAGTCACAAAATGGAATTTTGAAGAATCTCTGAGGCTTTTTAGCTTAGGAGCTTTCAAACAAAACCATCCTAAAGAGGGTTACAAACTTCTCTCACAAAGAGCAGTTGCATATGCAGGAGGCGTTCCATTAGCTTTAAAAGTTTTGGGTTCACATTTTTATTCTAGAAGTCCTGAATTCTGGGAACCTGAATTGAAAAATTTGGAGAACAAGGGGGAATCCTTACGTGGAATTCAAGAAGTGTTAAGAGTAAGCTATAATGGATTAACAGTCCGAGAAAAGGAAATGTTTTTAGATATTGCGTTCTTTTTCAAAGATGAAAAAAGAGATTTTGTGACAAGAATACTAGATGCCTGTGGTTTCAATGCTGCCAGTGGAATAGTCACCCTTGAAGATAAAGCTCTTATCACTATTTCATATGATAATATAATACAAATGCACGACTTACTACAACAAATGGCTTTTGACATAGTTCGGCAAAAGAAAGACCAGACTAGCAGAGACCCGGAAAAATGCAGCAGGTTAAGAGATATTAAAGAAGTTTGTGATGTATTAAAAAATAACAAGGGCACTCCTAAAGTTGAAGGGATAATATTTGATTTGTCTCAAAAGGAAGATTTGCATGTCGGGGCAGACACATTCAAAATGATGACTAAATTAAGATTTCTAAGACTGTATGTCCCCTTGAGTAAGAAGATATCAACTACCATATATCATCCTGAGGATATGATGCCATTTTCGGATAAATTGAGATATCTTGAGTGGAGTGAATATCCCTTGAAGTCTCTTCCACACCCTTTTTGCGCTGAGCTACTTGTTGAAATTCACTTGCCTCGCAGCAATATAAAATATCTTTGGCACGGGATGCAGAAACTTGTGCATTTAGAAAAAGTCGACCTAAGGGAAAGCAAACAGCTGATGAAGCTCCCTGATTTGTCTGGTGCTGAAAAACTTAAATGGTTGTATCTCTCAGGTTGTGAAAGTTTACATGAAGTTCAACCATCTGTTTTTTCCAAGGACACACTTGTTACTTTGCTTTTAGATGGGTGCAAAAAGTTGGAGATTCTTGTTAGTGAGAATCATTTAACATCTCTACAGAAAATTGATGTCAGTGGCTGCTCAAGTCTCAGGGAATTTTCGTTGTCCTCAGATTCGATTGAAGAGTTGGATTTAAGCAATACAGGTATTGAAATACTGCACTCATCAATCGGTCGTATGAGCATGCTTTGGAGGCTTGATTTACAAGGTTTAAGACTTAAGAATCTCCCGAAAGAAATGTCTTCCATGAGATCACTTACAGAGATTGATCTTTCTAATTGCAATGTAGTAACTAAATCAAAGTTAGAAGCCTTATTTGGTGGTTTAGAATCGTTGATAATACTATATTTGAAAGATTGTGGCAACTTGCTTGAACTCCCTGTGAACATTGATTCCTTGTCATTACTGTATGAACTAAGACTAGATGGAAGCAATGTCAAGATGTTGCCTACAAGCTTTAAGAATCTTTCAAGACTACGTATTCTGTACTTAGACAATTGCAAGAAGCTTGGTTGTCTTTCGGAGGTTCCTCCACACATCGAAGAGCTTCATGTCAATAACTGCATCTCATTGGTGAAGGTTTCGAGTTTGAAGGCTCTTTCACATAGTATGAAGGGATGGAAGAAGGAAATTTCATTCAAGAATACCATAAAATTGGATGCACCTTCACTCAACCGTATTACAGAAGATGTCATATTAACAATGAAGAGTGCCGCATTTCATAATACTATAATTGTTTATGATGTGCACGGATGGAGTTATAACGGTGTTCATTTTTGGTTACCGGGATGCACAGTTCCAAGTCAGTTCAAATTCCGAGCAATAGGTTCCTCTTCCTCCATTACTATTAAAATTCCTCCACTTTCCAAAGATGTTGGATTCATTTATTCTGTTGTTGTTTCTCCATCCTTTCAAATGGAGGAGCATGGTAATAATCTAGAAATCAGATTCAAGTACTATTCGGAAAGTGGCGACTTGAATTTTATAAATAGTCATTCTATTAAAGATGTGAGCCTGGATCATGTTTTCATGTGCTATAATGAACCACATTTCATTGGAAATGCATTTGAATTCTCTGTTACAAATTTAAGTGGGGATCTTAATGGCTCTTATATTTTGAAAGAGTGTGGGATCTATCCAATTTATTACTCAGAATTTCCAAGGCTTGCAGCCACCATGAATTTGGACAGAGACTTAGAAAAGGAAATTGCATTGGAGTTGTCACGGAGCCTAGGATCAGATTTTCATGAATATATACAACAATTTCAGTCAGAATCAATTGCAAGATATGATGATGATGGTGATGATGATGAGAGAGAAATAGGAAATGAGATTGATGAGTCAGTTGAAAGACGTGATGAGAATGAAAGAACTAGCATTCAGAATAACCAACAAGATTTGAACTTGAATGAAAAATGCAGGTGTTCATCATTTGACTGCTTCATGGGTCCATTGAGCTATTTATGGAGATTAATCCGCCACGGCCTACTATGA 3534 0.3763 MSTSSKKYDVFISFRGQDTRETFTSHLHYALCKENIITYIDDNLVKGDEIGEALAEAIQDSRISLVVFSKNYATSKWCLNELLKILECKKLHGQVVIPVFYNTGTSEVRNQTGSYEKPFSHYEIEAINNESFANTVSEWRAALAEAANIPGWDSQSRTYKDDSQVIQSIVSDVWKKLALMYPNELKGLVHNDQHGSYTESLLKRYSRIGIWGMGGIGKTTIARQMFAKHFAQYESACFMENVSEEIEKFGPRYIRNKLLSELLKRQITASDILGAPFIERILSGRKFFIVLDDVDNAAQLEYLCSELDDLGPNSRLIITGRDRQTLKGKVDVIHEVTKWNFEESLRLFSLGAFKQNHPKEGYKLLSQRAVAYAGGVPLALKVLGSHFYSRSPEFWEPELKNLENKGESLRGIQEVLRVSYNGLTVREKEMFLDIAFFFKDEKRDFVTRILDACGFNAASGIVTLEDKALITISYDNIIQMHDLLQQMAFDIVRQKKDQTSRDPEKCSRLRDIKEVCDVLKNNKGTPKVEGIIFDLSQKEDLHVGADTFKMMTKLRFLRLYVPLSKKISTTIYHPEDMMPFSDKLRYLEWSEYPLKSLPHPFCAELLVEIHLPRSNIKYLWHGMQKLVHLEKVDLRESKQLMKLPDLSGAEKLKWLYLSGCESLHEVQPSVFSKDTLVTLLLDGCKKLEILVSENHLTSLQKIDVSGCSSLREFSLSSDSIEELDLSNTGIEILHSSIGRMSMLWRLDLQGLRLKNLPKEMSSMRSLTEIDLSNCNVVTKSKLEALFGGLESLIILYLKDCGNLLELPVNIDSLSLLYELRLDGSNVKMLPTSFKNLSRLRILYLDNCKKLGCLSEVPPHIEELHVNNCISLVKVSSLKALSHSMKGWKKEISFKNTIKLDAPSLNRITEDVILTMKSAAFHNTIIVYDVHGWSYNGVHFWLPGCTVPSQFKFRAIGSSSSITIKIPPLSKDVGFIYSVVVSPSFQMEEHGNNLEIRFKYYSESGDLNFINSHSIKDVSLDHVFMCYNEPHFIGNAFEFSVTNLSGDLNGSYILKECGIYPIYYSEFPRLAATMNLDRDLEKEIALELSRSLGSDFHEYIQQFQSESIARYDDDGDDDEREIGNEIDESVERRDENERTSIQNNQQDLNLNEKCRCSSFDCFMGPLSYLWRLIRHGLL* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0513 1177 ProSiteProfiles TIR domain profile. 6 177 IPR000157 GO:0007165
Mtr8g0513 1177 Gene3D - 2 177 IPR035897 -
Mtr8g0513 1177 Pfam NB-ARC domain 208 408 IPR002182 GO:0043531
Mtr8g0513 1177 SUPERFAMILY "Winged helix" DNA-binding domain 412 518 IPR036390 -
Mtr8g0513 1177 Gene3D - 178 334 IPR027417 -
Mtr8g0513 1177 Gene3D - 340 424 IPR042197 -
Mtr8g0513 1177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1006 1101 IPR044974 GO:0006952
Mtr8g0513 1177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 958 IPR044974 GO:0006952
Mtr8g0513 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 434 IPR027417 -
Mtr8g0513 1177 PANTHER NB-ARC DOMAIN PROTEIN 1006 1101 - -
Mtr8g0513 1177 PANTHER NB-ARC DOMAIN PROTEIN 6 958 - -
Mtr8g0513 1177 SUPERFAMILY L domain-like 533 874 - -
Mtr8g0513 1177 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 152 IPR035897 -
Mtr8g0513 1177 SMART till_3 7 149 IPR000157 GO:0007165
Mtr8g0513 1177 PRINTS Disease resistance protein signature 207 222 - -
Mtr8g0513 1177 PRINTS Disease resistance protein signature 281 295 - -
Mtr8g0513 1177 PRINTS Disease resistance protein signature 373 387 - -
Mtr8g0513 1177 PRINTS Disease resistance protein signature 694 710 - -
Mtr8g0513 1177 Gene3D Ribonuclease Inhibitor 718 895 IPR032675 -
Mtr8g0513 1177 Gene3D Ribonuclease Inhibitor 484 717 IPR032675 -
Mtr8g0513 1177 Pfam TIR domain 7 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0513 Mtr-Chr8 6063367 6069411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0513 3 819 WRKY Transcription Factor Family AT4G12020 33.094 1.50e-95 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0513 - - mtr:MTR_8g017800 2285.76