Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0499 ATGGCACATCACTCTTGCTGTAGCAAGGAGAAGGTCAACAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATGGACAAGATTGCTGCTGGAGTTCTGTCCCAAAACTTGCTGGTCTGCAGAGATGTGGAAAAAGTTGTAGATTAAGATGGATAAATTATCTAAGACCTGATTTAAAACGTGGAAGTTTCTCTTATGAAGAAGTAGCAATCATTATAGAACTACACAGCATTCTAGGCAATAGATGGGCACAAATTGCCAAGTACTTGCCAGGAAGAACCGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATAAAGAAAAAACTCCTTTCTGATGATATTGTTCCATCCTTCACCCCATTTTATGATGATATTCACCTCTCCTACAGTGATGGTTTTAAGGAAACTTTTTTTCCTTTAAATGCAAACCCTAATGTGATGCTAAACTTCAATCCTCACCATCAAGATCACCTATACCTTTCAAACTCGTCTCCAAATATGCAATGTTTTCACCAAACTGGTACAATGGTAGACATCAATAACCATTTCAATGCCAGATTCCTACCCAATCAAAATCCAATTATACCTGAAATAGTACTACCATCTAATCCTTCCTCTTGTGAAGATACATGGTCATTGGATTGTGTAGCTCTTGATCTCAATCCAAGTCAATTGGAAAATCAAATTTCAAAAAGTGGCACCACTCCATTTAATATTGGTGACACATCAATCAACCAAAGTTCATTAATGCAGCAATATGATCAATATCATGATCATAACTTGGTTGAACATGAAGCCATTGTGCCTAAATTACTCGATGATCAAAGCCTTGAAAATTATGCATGTAGCATCCTAGATTATTCATCTGATTCCAAGGAACAAGTGATCCTAAACTCCAATCATCATCATCAAGATCAGTTCTACCTTCCAACCTCATCTCCAAATCTACAAGGAAATTTTTACCAAATTGATACAAATGTAGACATGATCAATAACCATTATAATCCCAATTTCCTTGACATTGAGAATCAAATACCATCTAATCCTTTCCCTGATGAAGATACATGGTCATTAGAGTGTGTGGCTCTTCATATCAATAGAAATAAAGAAAATCCAAGTGATACTACCCAACATCACAATTTAGTCAACCCAATTGCATCAATGGCACAACAATATGATCAATGTCATGATCATCACTTGGTTGAAACTGAACCCAATATTTTGCCTCAATTAGTCAATGATCAAAGCCTTGAGGACCATGATTGTTGCATCCTAGATTCATTTGATTCCAAGGAACATGAAGCTCTTAGTATTATTTATCCACAAGGTCAAAATATGGAAGCTAACCAATTGGATAATTACATTGATGCCCTCAGGTTATCATTGCCATCATCAAGCAGCCAAACAGTTAATTACAATACAAACCCTAGTATTCCTTTAGGATGGCAGCCATAG 1479 0.3631 MAHHSCCSKEKVNRGLWSPEEDEKLIKYITTYGQDCCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSYEEVAIIIELHSILGNRWAQIAKYLPGRTDNEVKNFWNSSIKKKLLSDDIVPSFTPFYDDIHLSYSDGFKETFFPLNANPNVMLNFNPHHQDHLYLSNSSPNMQCFHQTGTMVDINNHFNARFLPNQNPIIPEIVLPSNPSSCEDTWSLDCVALDLNPSQLENQISKSGTTPFNIGDTSINQSSLMQQYDQYHDHNLVEHEAIVPKLLDDQSLENYACSILDYSSDSKEQVILNSNHHHQDQFYLPTSSPNLQGNFYQIDTNVDMINNHYNPNFLDIENQIPSNPFPDEDTWSLECVALHINRNKENPSDTTQHHNLVNPIASMAQQYDQCHDHHLVETEPNILPQLVNDQSLEDHDCCILDSFDSKEHEALSIIYPQGQNMEANQLDNYIDALRLSLPSSSSQTVNYNTNPSIPLGWQP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0499 492 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Mtr8g0499 492 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mtr8g0499 492 Gene3D - 69 124 - -
Mtr8g0499 492 SMART sant 67 115 IPR001005 -
Mtr8g0499 492 SMART sant 13 64 IPR001005 -
Mtr8g0499 492 PANTHER TRANSCRIPTION FACTOR MYB26 1 303 - -
Mtr8g0499 492 CDD SANT 70 110 IPR001005 -
Mtr8g0499 492 Gene3D - 6 67 - -
Mtr8g0499 492 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mtr8g0499 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mtr8g0499 492 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mtr8g0499 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mtr8g0499 492 CDD SANT 17 62 IPR001005 -
Mtr8g0499 492 PANTHER MYB DOMAIN PROTEIN 55 1 303 - -
Mtr8g0499 492 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0499 Mtr-Chr8 5802697 5804715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0499 1 201 MYB Transcription Factor Family AT3G13890 57.895 6.67e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr8g0499 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0499 K09422 - mtr:MTR_8g017350 1015.76