Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0481 ATGGAGATCAAGAAAGGGGTCTACACGCCTTATGAAAATGTGCTTTTATGTATAAGGGTGCTCCCACATTCTAAGAACAATAACACATACATGTCTATGGCTTCTTCTTCTTCCTCTTCCTCTCAAGCTGCTACTGTACCTCGGGAAAAATATGATGTTTTCATCAGCTTTAGAGGCGACGACACTCGCGCTGGATTCACAAGCCATCTTTACGCTGCTTTGTGCCGAAACTATATCCATACCTACATAGACAAAAAGATCGAGAAAGGAGATGAAGTTTGGGCAGAACTTGTGAAAGCAATCAAACAATCCACTCTGTATCTTGTGGTGTTCTCGGAGAACTACGCGTCATCAACATGGTGTTTGAACGAACTCGTTCAAATAATGGAGTGTAATAACAAAAATGAAGATGACAATGTTGTTGTTATTCCTGTGTTCTACCATGTTGACCCTTCACAAGTGCGGAAACAGACCGGAAGTTATGGCACTGCTCTGGCTAAACACAAGGAGCAAGGCAACGACCATGAGATGCAAAAATGGAATACTGCTCTTTTTCAAGCTGCTAATTTGTCTGGTTTTCATTTAGCCAAAAACAGGACTCAAACTGAATCCAACTTAATTGAAGACATTACCAGAGCTGTAATAAGAAAATTAAATCAACAAAGCACAATTGATCTTACTTGTAATTTCATACCTGATGAAAACTATTGGAGCGTTCAATCTTTAATAAAATTTGACTCAACAGAAGTTCAAATCATTGGACTTTGGGGTATGGGAGGCATAGGTAAGACAACCCTTGCCACTGCTATGTTTCAAAGGGTCTCTTTCAAATATGATGGCAGTTGCTTCTTTGAGAAGGTGACAGAAGTATCAAAAAGTCATGGAATCAATTACACATGCAACAAACTTCTTTGTAAGTTACTAAAAGAAGATCTTGATATTGACACTCCCAAACTAATATCATCCATGATCAGAAGAAGACTCAAAAGCATGAAATCTTTCATTGTACTAGATGATGTACATAATTCAGAACTTCTGCAAAACTTGATTGGAGTAGGACATGGTTGGCTAGGATCTGGTAGTACAGTCATTGTGACTACTAGGGATAAACATGTGCTGATAAGTGGAGGAATTAAGACAATATATGAAGTTAAGAAGATGAACTCCCGAAATTCCCTCAGAATTTTTAGCTTGAATGCTTTTGACAAAGTCTCACCTAAGGATGGATATGTGGAGCTCTCAAAAAGAGCAATTGATTATGCCAGAGGAAACCCTTTAGCTTTGAAAGTATTGGGATCATTACTTCGTTGTAAAAGTGAAAAAGAATGGGATTGTGCATTAGATAAACTGAAAAAAATGCCAAACAACGAAATTGATTCTATATTTAGAATGAGTTTTAATGAATTGGATAAAACAGAGCAAAATATATTTTTGGATATTGCATGCTTTTTCAAAGGACAGGAAAGGAATAGCATAACAAAAATATTGAATGAGTGTGGATTCTTCGCTGATATAGGGATAAGTCATCTTTTAGACAAGGCTCTTGTAAGGGTTGACTCTGAAAATTGCATACAAATGCATGGCTTGATACAGGAAATGGGAAAACAAATTGTTCGTGAAGAATCACTTAAGAATCCCGGACAACGCAGTAGATTATGTGATCCTGAGGAAGTTTATGATGTATTGAAAAATAATAGAGGATCTGAGAAAGTTGAAGTCATATTTTTAGATGCTACTAAATACACACATTTAATTTTAAGATCCGATGCATTTGAAAAGATGGAAAATCTAAGGTTACTTGCTGTTCAAGACCACAAAGGAGTTAAATCTATAAGCCTTCCAGACGGTCTTGGTTTATTGCCAGAAAATCTGAGATATATTCTATGGGATGGCTATCCATTGAAAACTGTCCCTCTAACCTCCTCTCTTGAAATGCTTGTGGAGCTTTCCTTGAAACAAAGCCATGTGGAAAAACTTTGGAATGGAGTAGTGAATTTGCCCAATTTAGAGATAATTGACCTCAGTGGCTCCAAAAAGATGATAGAGTGTCCAAACGTGTCTGGTTCTCCGAATCTAAAAGATGTAATACTTAAGAGATTGTGA 2103 0.3704 MEIKKGVYTPYENVLLCIRVLPHSKNNNTYMSMASSSSSSSQAATVPREKYDVFISFRGDDTRAGFTSHLYAALCRNYIHTYIDKKIEKGDEVWAELVKAIKQSTLYLVVFSENYASSTWCLNELVQIMECNNKNEDDNVVVIPVFYHVDPSQVRKQTGSYGTALAKHKEQGNDHEMQKWNTALFQAANLSGFHLAKNRTQTESNLIEDITRAVIRKLNQQSTIDLTCNFIPDENYWSVQSLIKFDSTEVQIIGLWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSHGINYTCNKLLCKLLKEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLISGGIKTIYEVKKMNSRNSLRIFSLNAFDKVSPKDGYVELSKRAIDYARGNPLALKVLGSLLRCKSEKEWDCALDKLKKMPNNEIDSIFRMSFNELDKTEQNIFLDIACFFKGQERNSITKILNECGFFADIGISHLLDKALVRVDSENCIQMHGLIQEMGKQIVREESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEVIFLDATKYTHLILRSDAFEKMENLRLLAVQDHKGVKSISLPDGLGLLPENLRYILWDGYPLKTVPLTSSLEMLVELSLKQSHVEKLWNGVVNLPNLEIIDLSGSKKMIECPNVSGSPNLKDVILKRL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0481 700 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 43 698 - -
Mtr8g0481 700 SUPERFAMILY "Winged helix" DNA-binding domain 457 563 IPR036390 -
Mtr8g0481 700 ProSiteProfiles TIR domain profile. 49 218 IPR000157 GO:0007165
Mtr8g0481 700 SMART till_3 50 190 IPR000157 GO:0007165
Mtr8g0481 700 Pfam NB-ARC domain 241 470 IPR002182 GO:0043531
Mtr8g0481 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 480 IPR027417 -
Mtr8g0481 700 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 193 IPR035897 -
Mtr8g0481 700 Gene3D Ribonuclease Inhibitor 556 700 IPR032675 -
Mtr8g0481 700 Gene3D - 230 379 IPR027417 -
Mtr8g0481 700 PRINTS Disease resistance protein signature 252 267 - -
Mtr8g0481 700 PRINTS Disease resistance protein signature 327 341 - -
Mtr8g0481 700 PRINTS Disease resistance protein signature 421 435 - -
Mtr8g0481 700 PRINTS Disease resistance protein signature 664 680 - -
Mtr8g0481 700 SUPERFAMILY L domain-like 525 695 - -
Mtr8g0481 700 Gene3D - 48 225 IPR035897 -
Mtr8g0481 700 Pfam TIR domain 50 224 IPR000157 GO:0007165
Mtr8g0481 700 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 698 IPR044974 GO:0006952
Mtr8g0481 700 Gene3D - 386 470 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0481 Mtr-Chr8 5590652 5597907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0481 51 698 WRKY Transcription Factor Family AT4G12020 31.024 4.16e-84 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0481 - - mtr:MTR_8g038815 1086.63