Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0475 ATGGGAGTGTTTCTAATTTTTCTGATATTTATGCTACATTTTGTCCTCAGTAATCAACAGCTTCATGAATTTTCAGACACCAATCTACCTCATTTCAGAACCAGAAGTCATTTAAGTATTGCAGTCCCGCCAACAGTGTCTTCTTCTCATGTTCGTTCAAGTATTGCACAACCACCTGACAAGTCATCGTCCGGCGTTCCTAGAAGTATTGCATTTCCACATTCCAAGTCACCTGACAAAGCTCCTAGAAAGGTATGGAAACATGGTTCTTTGGGTTCTCCAATATCACATCATAAGCATCATCATCATTCCCGAATAAAGAACGAAAATCGTACTCCAGGGACGAACTCTCCAATCCAGGCTCCTTCTTACAGCAGTCAAGGTCCTTCAGTTTTCAAAGCACAACCTCCTTTCTCTTCACCGAAGAGCAAGTTTATTCATGCACCTGCACCGTCACCAGCATTTTGGTCAGGCCATCTGGATGTGCCGTATCCTTCGCCTAGAATTTCACCTCTAGGTTCACCATTGAACAAGATTAAGACTCCACCACCAGCATATACATTGGTTCTTCCCCCTCCACCTCCTAATAAAGATTGCTTGTCCGTTACTTGTTCGGAGCCGTTGACATACACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCCGCATTGGTATTTCAATATACAAGTGTTTTCCTCTTGTTTCAAAGCTAGCTGATGAAATTGCAGCGAGTGCTATGCTGAACCATACACAAGTTCGTATTATGGGAGCCGATGCAGCTAACCAGCAACTAGATAAGACCAATATTATCATAAACTTGGTACCTAAAGGCGTAAAATTTGACAATACTGCAGCATTTTTAATATACAAGAAATTCTGGCACAGGGAGATTCTAATAGATGATTCCCTCTTTGGTGCTTATGAAGTACTTTATGTTCATTATCCAGGTCTTCCGCCATCTCCACCTTCAATTCCCTCAGGTGTTTCTAGTATAGATGATGGTCCAAATCCTGGTCGTGACAACAACGGAATGATGATGAAACCTTTAGGAGTAGCTTTACCAAACAAAGAAAAAGAAGGGAGCAACGGAAGAATGATTTTTATAATTGTACTGTCATCAATTACTGCTTTTGTTCTATTCCTTGGACTTGCTTGGCTTTGTCTGTTGAAATACAGTTGTTGTACTCATCAACATGAACACGTTTCAGATAGCTTAATGTCAACTTCTTCAAAACAGTTAAGGGTTTCCGGGTCATTAAATCATGGGATTATGTCAGGATCTGGATCACGATCCTTCAATTCAGGAATGATAGCATATACAGGGTCCGCCAAGAATTTTACCTTGAATGACTTAGAGAAAGCAACAAATAACTTTGACACTTCTAGAATATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGTGTTCTAAATGATGGGAGAGACGTAGCAGTAAAGATTCTCAAAAGAGAGGATCGACGTGGTGGCCGCGAATTCCTGGCAGAAGTTGAGATGCTTAGCCGACTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAAACTCGTTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTGCATGGTGCTGACAAGGAAAGCGATCCATTGGATTGGAATGCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCTTATCTGCACGAAGATTCCAATCCTTATGTCATACACCGGGACTTCAAGTCCAGTAACATCTTGTTGGGACATGATTTTACAGCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCTCTGGAAGATGGAAACAAGCACATCTCCACACATGTCATGGGAACATTCGGCTACTTAGCTCCTGAATATGCAATGACAGGTCATCTTCTCGCCAAAAGTGATGTTTACAGTTACGGAGTTGTACTCCTTGAGCTCCTAACCGGTAGAAAGCCTGTGGATTTGTCACAACCAGCAGGTCAAGAAAATCTCGTGACATGGGTCCGTCCACTTCTCACGAGTGACGAAGGCTTGCAAACAATCATAGACCCATTCGTAAAGCCAAACATATCCATTGATACTGTCGTAAAGGTTGCAGCGATTGCTTCCATGTGCGTTCAACCAGAAGTATCTCAACGACCTTTCATGGGAGAAGTTGTTCAAGCATTGCAGCTTGTATGCAGCGAATTTGAGGAAACAAACTACGTAAGATCAGGTAGTTTTCAAAAAGAGAGTCTTGTAACTAATGTCGAAGGTAAGTTTTTCGAGGTTTCAGATGAGAGAGTAGAGTTTTCGGAGTATCAAAAAACACTTCATGCCTATCAATCTGGTGATGAAAAGTTAAGATTATCAGATTCAGAGTTGCTCAGCACTTCAGGTCAAGAATTTGAGTCATTCAGGAGGCAATCCACTTCAGGGCCTATTACCACCGAGAAGAAAAGACATTTCTGGAAAAATTTGAGAGGTTTGTCTAAAGGTAGCACAAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCATTAA 2571 0.4181 MGVFLIFLIFMLHFVLSNQQLHEFSDTNLPHFRTRSHLSIAVPPTVSSSHVRSSIAQPPDKSSSGVPRSIAFPHSKSPDKAPRKVWKHGSLGSPISHHKHHHHSRIKNENRTPGTNSPIQAPSYSSQGPSVFKAQPPFSSPKSKFIHAPAPSPAFWSGHLDVPYPSPRISPLGSPLNKIKTPPPAYTLVLPPPPPNKDCLSVTCSEPLTYTPPGSPCGCVWPLQVKLRIGISIYKCFPLVSKLADEIAASAMLNHTQVRIMGADAANQQLDKTNIIINLVPKGVKFDNTAAFLIYKKFWHREILIDDSLFGAYEVLYVHYPGLPPSPPSIPSGVSSIDDGPNPGRDNNGMMMKPLGVALPNKEKEGSNGRMIFIIVLSSITAFVLFLGLAWLCLLKYSCCTHQHEHVSDSLMSTSSKQLRVSGSLNHGIMSGSGSRSFNSGMIAYTGSAKNFTLNDLEKATNNFDTSRILGEGGFGLVYKGVLNDGRDVAVKILKREDRRGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKESDPLDWNARMKIALGAARGLAYLHEDSNPYVIHRDFKSSNILLGHDFTAKVSDFGLARTALEDGNKHISTHVMGTFGYLAPEYAMTGHLLAKSDVYSYGVVLLELLTGRKPVDLSQPAGQENLVTWVRPLLTSDEGLQTIIDPFVKPNISIDTVVKVAAIASMCVQPEVSQRPFMGEVVQALQLVCSEFEETNYVRSGSFQKESLVTNVEGKFFEVSDERVEFSEYQKTLHAYQSGDEKLRLSDSELLSTSGQEFESFRRQSTSGPITTEKKRHFWKNLRGLSKGSTSEHGFSTKLWPGSH* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0475 856 MobiDBLite consensus disorder prediction 93 107 - -
Mtr8g0475 856 Gene3D Transferase(Phosphotransferase) domain 1 540 761 - -
Mtr8g0475 856 MobiDBLite consensus disorder prediction 110 136 - -
Mtr8g0475 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Mtr8g0475 856 Pfam Protein tyrosine and serine/threonine kinase 466 737 IPR001245 GO:0004672|GO:0006468
Mtr8g0475 856 ProSitePatterns Protein kinases ATP-binding region signature. 470 492 IPR017441 GO:0005524
Mtr8g0475 856 MobiDBLite consensus disorder prediction 331 350 - -
Mtr8g0475 856 ProSiteProfiles Protein kinase domain profile. 464 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0475 856 SUPERFAMILY Protein kinase-like (PK-like) 444 738 IPR011009 -
Mtr8g0475 856 Gene3D Phosphorylase Kinase; domain 1 438 539 - -
Mtr8g0475 856 MobiDBLite consensus disorder prediction 44 70 - -
Mtr8g0475 856 CDD STKc_IRAK 470 738 - -
Mtr8g0475 856 PANTHER OS01G0750732 PROTEIN 8 855 - -
Mtr8g0475 856 MobiDBLite consensus disorder prediction 44 136 - -
Mtr8g0475 856 PANTHER OS01G0750732 PROTEIN 8 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0475 Mtr-Chr8 5485194 5490559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0475 196 851 Receptor kinase-like Gene Family AT5G56890 56.842 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mtr8g0475 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0475 - - gmx:100814040 1302.73