Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0460 ATGAGTCGAGAGCAGCAGAAGAGGGGGAAGCAAGAGAAAGGCTGTGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCGACAAAGGAAATTCCGAAGACAGCTCTTGTTTGGTCACTGACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTGGTGGTTGTTCCTTCACAAAGTTCAGGTAGAAAATGGGGTTTTCCAAGATTTGCTGGTGACTGTGCCAGTGGTATTAAGAAGTATCCTCCAGGAACAATTTTAGAGCAGAAGAGTGATATCACTGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAGGATTAAAATTGTTTCCGGATCACCTTGCGGATCAGTGGCTGCAGAAGCCAAGAAAGGACAAGCTAGTTGGGTTGTATTAGACAAACATCTCAAACCCGAGGAAAAGAAATGCATGGAAGAGCTGCAGTGTAACATTGTTGTTATGAAGCGTGCTCAACCGAAAGTGCTTCGCTTGAACTTGATTGGACCAAAAAAGAAGGAAGTTGAAGAGGCATGTACATCACCTTCTGTGCAAGACGATATGCTTGAAAAGCAAACCAAAAATAAGATTGATTCTTTAGTAGATTCTATCAAAGGACCAAATGTTACTCCAACTAGCAGCCCTGAGTTAGGTACACCATTCACTACTACTACTGAGGCCGGTACTTCATCAGCCTCAAGCTCTGATCCTGGAACATCACCGTTCTTTATCTCAATGAATAGTGAGTCGAAGAAAGAGGAAACCATCAAGGAAAGTCAAGAACTTTGTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCCGCTAGCTTTAGATACCAGCCGTGGATCACGGAATTGCTTTTACATCAACAATCATCTCAACACAACGAGGAAAGATCCGAGCCTTATCACGGTATGCCTCAAGCAACTACAACCAAAGCCTTGCTAGAAAAGTTTTCTAGGCTTGATAGAGGAGCTGGAATTGAAATGTCGGCAGCATATAGAAAGGACTCGGACTTTAGTGGTAATTTAAGAGAAGCAATAGCATTATCAGGAAATGCTCCACTTGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCACCTGTATTTGGAAAACCTCCGAGGTGGTTCAGCTATGCTGAGTTGGAACTCGCTACCGGTGGATTTTCACAAGCTAACTTCTTGGCAGAAGGAGGGTATGGTTCTGTTCACCGAGGGGTTCTACCAGAAGGACAGGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTTGAGTTTTGCTCTGAGGTAGAAGTTCTGAGCTGTGCTCAGCACCGGAATGTTGTTATGCTGATTGGATTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGCGGCAAAGGGATCCATTAGAATGGTCCGCACGGCAGAAAATTGCTGTTGGAGCTGCTCGTGGGTTAAGGTATCTTCATGAAGAGTGCAGAGTAGGTTGTATCATCCACCGTGACATGAGGCCAAACAATATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAACCTGATGGAGACATGGGTGTGGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCATTTGGGGTGGTACTGGTGGAGCTTGTAACTGGTAGAAAAGCTGTTGATCTCACTAGGCCCAAGGGACAACAGTGCCTTGCTGAGTGGGCACGGCCGCTGTTAGAAGAATATGCCATTGACGAACTGATTGACCCGAGGCTGGGAGGTCACTATTTAGAACATGAGGTCTATTGCATGCTTCATGCTGCTTCATTATGCATAAGGAGAGATCCTCATTCTAGACCACGGATGTCACAGGTTCTCCGAATTCTAGAGGGTGATATGGTGATGGACGCAAATTACATTTCAACTCCAGGCTATGATGTTGGAAACAGGAGCGGTCGCCTTTGGTCAGAGCCACTGCAGAGGCAGCACCATTGCAGTGGTCCCCTCTTAGAAGATTCATTGGAGTCATCATTCAGTGGAAATCTATCTCTTGACAAGTATAAACCTGCTTCCTATTGGGATAGGAGCAGGGACAAGCCAAGAAGGGCATCATGTGAAGGTGATACTTGA 2268 0.4414 MSREQQKRGKQEKGCDGAEKVIVAVKASTKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKWGFPRFAGDCASGIKKYPPGTILEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGSVAAEAKKGQASWVVLDKHLKPEEKKCMEELQCNIVVMKRAQPKVLRLNLIGPKKKEVEEACTSPSVQDDMLEKQTKNKIDSLVDSIKGPNVTPTSSPELGTPFTTTTEAGTSSASSSDPGTSPFFISMNSESKKEETIKESQELCDTNSDTESESLSTSSASFRYQPWITELLLHQQSSQHNEERSEPYHGMPQATTTKALLEKFSRLDRGAGIEMSAAYRKDSDFSGNLREAIALSGNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLAEWARPLLEEYAIDELIDPRLGGHYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMDANYISTPGYDVGNRSGRLWSEPLQRQHHCSGPLLEDSLESSFSGNLSLDKYKPASYWDRSRDKPRRASCEGDT* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0460 755 MobiDBLite consensus disorder prediction 215 259 - -
Mtr8g0460 755 PANTHER OS01G0253100 PROTEIN 16 710 IPR045271 GO:0004714|GO:0006468
Mtr8g0460 755 MobiDBLite consensus disorder prediction 211 288 - -
Mtr8g0460 755 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 710 - -
Mtr8g0460 755 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672|GO:0006468
Mtr8g0460 755 ProSiteProfiles Protein kinase domain profile. 405 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0460 755 Gene3D HUPs 5 166 IPR014729 -
Mtr8g0460 755 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Mtr8g0460 755 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Mtr8g0460 755 MobiDBLite consensus disorder prediction 260 274 - -
Mtr8g0460 755 CDD STKc_IRAK 411 677 - -
Mtr8g0460 755 SUPERFAMILY Protein kinase-like (PK-like) 389 683 IPR011009 -
Mtr8g0460 755 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0460 Mtr-Chr8 5357618 5363859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0460 344 671 Trihelix Transcription Factor Family AT1G68690 50.000 1.22e-102 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mtr8g0460 PK_Tyr_Ser-Thr 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0460 - - cam:101503019 1349.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0460 8 5357618 5363859 Mtr8g0460 8 5357618 5363859 ECH
Mtr2g3511 2 49185589 49190636 Mtr8g0460 8 5357618 5363859 PCT