Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0458 ATGCCATACTCTTGGAGCTCACAAGGTGCACTTTCATGGATTTGTGGAGGAGAAGTAAACTTGTCTTCTTTTTGTGTTCAAAGATGCATAATAGATGGAGTGAACATTATCTTTTCCTGTGTTTTCTACCTATTTATGCTGATTACTTTAATTAGAAAACAACATTCACCCGACAACAATCGAAAGGATCGCGTTATGGTGGTTGCATCAATCTGTTGTTTTCTTACTTGCATCATGTATCTAGGCAATGTTTTGTACAATTTCATAGATCAAGATGGAAAAATAGATAACCTAAGTTGGGTAATTAGAGGACTAATTTGGAGCTCTTTTGCTGTTTCATTACTTATTCAAAAGAGTAAATGGATCTTGTGTCTAAGTTCTGTTTGGTGGATCTGTTTTTGTGCATTACTTTCCATATTGAACATTCAAGTTCTTAAGACAGTTCATAGTATTCCTGTGTTTGATTTGATTCCTTGGCTTGTAAGTTTCCTTCTTCTTTATTGTGCTTTCAGAAACTATAGTTACTTCACTTCAAAACATTCACAAAAGAGCACAATGTTTGAAGAACCATTGTTATGTGAAACTGAAAAGGAACCAATAGTCCAACAGCAACCAGGATTAAGCCATTCCAATTTCATAAGCAAATTAACATTTTCTTGGCTTGATCCTTTACTCTCTTTAGGTTATACAAAACCATTAGTTCTTACAGACATTCCTTCTTTGCCTAATGAAGACAAAGCTAACAATTGTTACCAAAAGTTTGTTGGCACAAGGGATTCCTTGTTAAGGAGAAGTAGCACAAACATTCCAAAGAATTTTCTTATTTTGGCAATGTCAAGAGCTTTTTTGAAAGAGAATATTTATATAGCAATATGTACATTAGTTAGGACTATCTGTGCAGCTGTTTCTCCTTTATTCGTATATGCTTTTGTAAACCACGCGAGCTGCGAATGCGACGAAGAAGAGTATTTTTATGAAGGTGTTACTTTATTAGGGTGCCTTGTGTTGGTCAAATTAGTTGAGTCAGTAACTGAAAGACAGTGGTACTTTGAATCAAGGAGGGCAGGAATGAGAATGAGATCCTCTTTAATGGTTGCAGTGTATGAAAAGCTATTGAACCTTTCGAGTTTTGGAAGGAAAAGGCACTCAAATGGTGAAATCGTGAATTTCATAGCTGTTGATGCATACAGAATGGGAGAGTTTTTGTACTGGTTTCATTCAGGATGGAGTTTTGTGTTGCAACTTTTGTTATCTATTTGTGTACTTTTTTGGATTGTTGGTCTTAGTGCAATTCCTGGATTGATTCTTCTTGTCATATTTGGAGTCTTTTTCAATATTCCATATGCAAAGAAGATAAAAAGTTGCAAGTCACAGGTGTTGATTTCACAGGATCAAAGACTCAGGTTAACTTCAGAGATTCTTAACAATATCAAAGTTATTAAACTACAAGGTTGGGAGGATAAGTTTATGAACATGATAGAGTCGATTCGCGATGTCGAGTTCAAATGGTTGGCTCAGACACAGTTCACTAAGGCTTTAGGATCTTTTCTTTACGTTTCTCCACCAATTATTGGTGCTGTTGTTTTAATAGCATGCTCTCTCTTTGGTACTGCTCCATTAAATGCTGCAACTATCTTCACTGTTCTTGCTATATTGAGAAGTGTGGCAGAACCTGTGAGGTTTATACCCGAAGCTGTTTCTGTTATTATTCAAGTTAAAGTCTCATTTGATAGGCTTAACATTTTTCTGTTTGATGATGAGATAAATACTTCCTACCAAAAGAAGAGCATTTATGTTTCAAAATCAGGTAAATGCATTGAGATAGAGGAAGCTGATTTCAGTTGGGATGAGGGATCAGTTACACCTACTTTGAGACAAATTAATTTCGGCATCAAACATGGTGAAAAAGTTGCAGTTTGTGGACCAGTTGGGGCTGGCAAGTCTTCTTTGCTTCATGCTATCCTTGGAGAAATGCCTAAAGTTTGTGGAACTCTTAATTTGCATGGTGAGGTAGCCTATGTTTCTCAAACATCATGGATACAAAGTGGAACAATTCGTGATAACATACTCTTTGGAAAATTAATGGAAAGGAACAGATATGAGAATGCAATAAAAGCATGTGCTTTGGACAAGGATATAGATGGTTTTAGCCATGGTGATCTTACAGAAATAGGACAGAGAGGACTTAACTTGAGTGGAGGGCAAAAGCAAAGAATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATGTATATCTTCTTGATGACCCTTTTAGTGCAGTAGATGCACATACTGCTGCAATTCTATTTCATGATTGTGTCATGAGTGCTCTCAAAGAGAAAACAGTCATCCTAGTGACACATCAAGTAGAGTTTCTGACAGAAGTTGATAAAATTCTGGTTATGGAGGGTGGAGTTATTAATCAAGCAGGAAGCCATGAGGAATTGTCGACATCTGGAACAACCTTTGAACAACTTATGAATGCTCATAGAGATGCAATATCTGTAATAGGTACTACAAGTAGTCAAAACAAAGGAAAAAGTCAAGAAATAGAAAGAGTTAGTGATCCTGCTACTAAGAAAAACAACAATGATGAAATATGTGAGACAAGTATCGGCGGGCAACAACTTACTCAAGAAGAATATATAGAAATTGGAAGTTCTGGATGGGAACTGTACTTGGATTACATTATAATCTCCAAGGGAATGCTTCTTCAGTTTTTAAGCTTAATAGCATTGTTAGGTTTTGCTGCTTTTTCAGCTGGTGCATCTTATTGGATTGCTCTATCAAGTGAATTTCCAAGCATCACTAAAGGCTGGATGGTTGGAGTTTACACTGCAATGTCAATTCTTAGTGCTATTTTTGCTTACTTGAGGTCTGTATTGGTAGCCCATCTTGGACTAAAGGCTTCTAAAGAATTTTTCTCAGGTTTCACTTCTTCCATTTTCAATGCTCCCATGTCATTCTTTGATTCAACACCTGTTGGAAGAATTTTGACTAGAGCGTCATCAGATTTCAATACTTTGGATTTTGATCTGCCTTTTGCAACAGTCTATGTAGCACAAAGTGCAGTTCTTCTTATAACAGGAATCTTGATCATGAGCTCGGTTACATGGCAAGTTGTTATAGTTTCCATTCTAGCTGCAGTTACAGGATACTATATAAAGGAATACTATCAAGCCTCTGCAAGGGAGCTAGTAAGAATTAATGGAACAACAAAAGCACCAGTTGTGAGTTATACAACTGAGACATCAGCAGGAGTGGTCACAGTGAGAGCCTTTAAGATGATGGACAGATTCTTCAAAAATTTCCAACATCTAGTTGACACAGATGCTGCACTATTCTTGCATACCAATGCTGCTTTGGAGTGGTTACAATCAAGGATGGATATACTTCAAAATTTTATCCTTTTTACAGCAGCTTGTCTATTTGTGTTTCTTCCCATGGGATCAATTATTCCAGGCCTTGTGGGACTTTCACTCTCTTATGCTTTGTCATTAACAAGATCCCAAATGTATTATACTACATGGTCTTGTAGCATATCAACCTTCATAATCTCTGTGGAAAGAATCAAGCAATTCATGCAGATACCACAAGAGCCTCCAAAATTATTGGAGGATAGAAGGCCACCATCTTCATGGCCTTCTAAGGGAAGGATAGAGTTCCATGATTTGATGATTAGATACCGTCCAAATGCTCCATTAGTACTAAATGGAATCACATGTACTTTCAAAGAAGGAACCAGAGTAGGAGTTGTGGGAAGAACTGGGAGTGGGAAAACAACACTTTTAAGTGCATTGTTTCGTTTGGTGGAACCTACAAGTGGTGAAATACTTATAGATGGACTTAACATATGCTCAATTGGTCTTAAAGATTTAAGAATGAAGCTAAGTATCATCCCTCAAGAACCAATTCTTTTCAAGGGTAGTGTTAGAACCAACTTGGATCCACTAGACCAATTCTCAGATGATGAGATATGGAAGGTTTTAGAGATGTGTCAACTCAAGGAGGTTTTATCTGGACTGCCACATCTTTTGGACTCATCAGTGAGTAATGAAGGGGAAAATTGGAGCATGGGCCAAAGACAATTGTTTTGCCTTGGAAGAGTCCTTCTTAAAAGAAATAAAATTCTAGTTTTGGATGAAGCTACTGCCTCTATTGATTCTGCCACAGATGCTATTCTACAAAAAATAATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTAGCTCATAGAGTTCCAACTGTTATTGACAGTGATATGGTCATGGTTCTTTCTTATGGAAAACTGGTTGAATATGATGAACCTTCAAAACTGATGGAGGACAATTCTTCTTCATTCTCCAAGCTTGTAGCTGAATACTGGTCCAGCTGCAGGGGAAACTCCTTATAA 4398 0.3706 MPYSWSSQGALSWICGGEVNLSSFCVQRCIIDGVNIIFSCVFYLFMLITLIRKQHSPDNNRKDRVMVVASICCFLTCIMYLGNVLYNFIDQDGKIDNLSWVIRGLIWSSFAVSLLIQKSKWILCLSSVWWICFCALLSILNIQVLKTVHSIPVFDLIPWLVSFLLLYCAFRNYSYFTSKHSQKSTMFEEPLLCETEKEPIVQQQPGLSHSNFISKLTFSWLDPLLSLGYTKPLVLTDIPSLPNEDKANNCYQKFVGTRDSLLRRSSTNIPKNFLILAMSRAFLKENIYIAICTLVRTICAAVSPLFVYAFVNHASCECDEEEYFYEGVTLLGCLVLVKLVESVTERQWYFESRRAGMRMRSSLMVAVYEKLLNLSSFGRKRHSNGEIVNFIAVDAYRMGEFLYWFHSGWSFVLQLLLSICVLFWIVGLSAIPGLILLVIFGVFFNIPYAKKIKSCKSQVLISQDQRLRLTSEILNNIKVIKLQGWEDKFMNMIESIRDVEFKWLAQTQFTKALGSFLYVSPPIIGAVVLIACSLFGTAPLNAATIFTVLAILRSVAEPVRFIPEAVSVIIQVKVSFDRLNIFLFDDEINTSYQKKSIYVSKSGKCIEIEEADFSWDEGSVTPTLRQINFGIKHGEKVAVCGPVGAGKSSLLHAILGEMPKVCGTLNLHGEVAYVSQTSWIQSGTIRDNILFGKLMERNRYENAIKACALDKDIDGFSHGDLTEIGQRGLNLSGGQKQRIQLARAVYNDADVYLLDDPFSAVDAHTAAILFHDCVMSALKEKTVILVTHQVEFLTEVDKILVMEGGVINQAGSHEELSTSGTTFEQLMNAHRDAISVIGTTSSQNKGKSQEIERVSDPATKKNNNDEICETSIGGQQLTQEEYIEIGSSGWELYLDYIIISKGMLLQFLSLIALLGFAAFSAGASYWIALSSEFPSITKGWMVGVYTAMSILSAIFAYLRSVLVAHLGLKASKEFFSGFTSSIFNAPMSFFDSTPVGRILTRASSDFNTLDFDLPFATVYVAQSAVLLITGILIMSSVTWQVVIVSILAAVTGYYIKEYYQASARELVRINGTTKAPVVSYTTETSAGVVTVRAFKMMDRFFKNFQHLVDTDAALFLHTNAALEWLQSRMDILQNFILFTAACLFVFLPMGSIIPGLVGLSLSYALSLTRSQMYYTTWSCSISTFIISVERIKQFMQIPQEPPKLLEDRRPPSSWPSKGRIEFHDLMIRYRPNAPLVLNGITCTFKEGTRVGVVGRTGSGKTTLLSALFRLVEPTSGEILIDGLNICSIGLKDLRMKLSIIPQEPILFKGSVRTNLDPLDQFSDDEIWKVLEMCQLKEVLSGLPHLLDSSVSNEGENWSMGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQKIIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMEDNSSSFSKLVAEYWSSCRGNSL* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0458 1465 Gene3D ABC transporter type 1, transmembrane domain 273 578 IPR036640 GO:0005524|GO:0016021
Mtr8g0458 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 598 829 IPR027417 -
Mtr8g0458 1465 CDD ABC_6TM_ABCC_D1 288 579 IPR044746 GO:0140359
Mtr8g0458 1465 CDD ABC_6TM_ABCC_D2 907 1195 IPR044726 GO:0140359
Mtr8g0458 1465 SUPERFAMILY ABC transporter transmembrane region 275 579 IPR036640 GO:0005524|GO:0016021
Mtr8g0458 1465 SMART AAA_5 633 806 IPR003593 -
Mtr8g0458 1465 SMART AAA_5 1246 1438 IPR003593 -
Mtr8g0458 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 78 1463 - -
Mtr8g0458 1465 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 78 1463 - -
Mtr8g0458 1465 CDD ABCC_MRP_domain2 1218 1438 - -
Mtr8g0458 1465 Pfam ABC transporter transmembrane region 288 548 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0458 1465 Pfam ABC transporter transmembrane region 908 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0458 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0458 1465 ProSitePatterns ABC transporters family signature. 731 745 IPR017871 GO:0005524
Mtr8g0458 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1220 1454 IPR003439 GO:0005524
Mtr8g0458 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1170 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0458 1465 SUPERFAMILY ABC transporter transmembrane region 901 1202 IPR036640 GO:0005524|GO:0016021
Mtr8g0458 1465 CDD ABCC_MRP_domain1 606 805 - -
Mtr8g0458 1465 Pfam ABC transporter 1237 1385 IPR003439 GO:0005524
Mtr8g0458 1465 Pfam ABC transporter 624 758 IPR003439 GO:0005524
Mtr8g0458 1465 Gene3D ABC transporter type 1, transmembrane domain 874 1201 IPR036640 GO:0005524|GO:0016021
Mtr8g0458 1465 Gene3D - 579 853 IPR027417 -
Mtr8g0458 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 606 829 IPR003439 GO:0005524
Mtr8g0458 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1211 1446 IPR027417 -
Mtr8g0458 1465 Gene3D - 1204 1455 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0458 Mtr-Chr8 5325707 5334079 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0458 606 859 Calmodulin-binding Proteins AT2G36910 25.430 7.93e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0458 - - jre:108991293 1850.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0458 8 5325707 5334079 Mtr8g0458 8 5325707 5334079 ECH