Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0456 ATGGCTTACTTTGATAACACAATAGGTGAAATTTCATGGATTTGTTTGAAGAATTTCGATTTCAATTCTTTATGTTCTCAAAGGAGCTTAATAGACACTATCAATATACTCTTTGTATGTGTCTATTGCACATCTTTGATTATCACTTTAATCAGAAAAAGTTCTACAAATGGAAGCCACGGAAAATGCTGGATTTTCATTATTGTCTCAATTTGTTGTGGTACTATTAGCATTGCATTTTTCAGTATTGGATTGTGGGATTTCATAGCTAAAACTGATAACTCTGAGAAACTGAGTTGCATTATCAAGGGATTGATTTGGATTTCTTTGTCTGTTTCCTTGATCGTTCAAAGAGTCAAATGGATTAGGATATTAATCTCTATATGGTGGACATTTTCTTGTGTATTGGTTTCATCTCTCAACATTGAAATTCTGTTAAGAAATCATGCAATTGAAACATTTGATATTGTACAGTGGCTTGTACATTTCCTTCTTCTATATTGTGCCTTCAAAAATCTTGATTATATAGGAACTCATAGTGTACAAGAAGGTTTAACTGAGCCACTCTTAGCTGGAAAAAATGAAACTAAACAAACAGGATTAGGCCGTGCTACTTTTCTTAGCAAGTTGAATTTCTCTTGGATTAATTCTTTACTCAGTTTAGGTTACTCAAAGCCGCTTGATCTTGAAGATATACCTTCCGTTGTTTCTGAAGATGAAGCTGACATGTCGTATCAAAAATTTGTTAATGCTTGGGAATCACTTGTGAGAGAGAGGACAAAGAATAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTAGAACTTTCTTGAAAGAAAACATATTAATAGCATTTTATGCATTAATAAGAACTGTTTCGGTTGCAGTTTCACCTCTTATACTCTATGCTTTTGTTAACTACTCAAATAGAACCGAGGCAGATCTCAAACAAGGTCTTTCCATAGTTGGTATTTTGATTCTCACCAAAGTTTTTGAGTCTTTATCTCAAAGGCATTGGTTTTTTAACTCAAGGAGGTCAGGAATGAAAATGAGATCAGCTCTTATGGTGGCGGTTTACCGAAAGCAGTTAAAGCTTTCTAGCTCGGCAAGGCAGAGACACTCGGCCGGTGAAATTGTGAATTACATTGCAGTTGATGCATACAGAATGGGAGAATTTCCATGGTGGTTTCATACAACATGGACTTGTGCATTTCAACTTATTCTTTCCATTAGTGTCCTCTTTGGTGTTGTCGGTGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTCCTCAATGTACCATTTGCAAGGATCCTACAAAACTGTCAGTCACAGTTTATGATTGCACAGGACGAACGTCTTCGATCAACTTCGGAGGTTCTAAATAGTATGAAGATCATTAAGTTACAGTCATGGGAAGAAAAATTCAAGAACTTAGTTGAGTTGTTACGCGATAAAGAGTTTGTATGGTTGTCGAAGGCACAGATCCTGAAAGCTACTAATTCATTTCTCTATTGGATGTCTCCTACAGTTGTATCTGCTGTTGTTTTTGTTGGATGTGCTGTTACCAAGAGTGCACCATTAAATGCTGAAACCATTTTCACAGTTCTTGCAACATTGAGGAACATGGGAGAACCTGTTAGAATGATCCCTGAAGCTCTATCCATTCTGATTCAAGTTAAGGTTTCGTTCGATCGTCTTACTAATTTTTTGCTTGATGAAGAACTAAACAATGATGATAGTGAAAGAAACATACAGCAACTTTCGGTCAATGCTGTGGAGATTCAAGATGGAAACTTCAATTGGGATCATGAATCTATGTCTCCAACCTTAAAGGATGTAAATTTAGAAATCAAATGGAGACAGAAAATAGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCACTTTTGTATGCAATACTTGGAGAGATTCCCAAGATTCAAGGAACTGTTAATGTTGGTGGCACACTGGCCTATGTTTCTCAATCTTCTTGGATACAAAGTGGAACAGTTCAAGAAAATATACTCTTTGGCAAGCCAATGGATAAAAGAAGATATGAGAAAGCAATCAAAGCTTGTGCCTTAGATAAGGATATCAATGATTTTAGCCATGGTGATCTTACAGAAATCGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACAGCTGCAATACTATTCAATGATTGTGTCATGACTGCTTTAAGAGAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACTATCTTGGTCATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTGACAGCTGGAACAGCCTTTGAACAACTTGTGAGAGCACATAAGGACACAATTACTGAGTTGAATCAAGATCAGGAAAATAAAGAAGGTTCTGAAAATGAGGTTTTGGCTAAACATCAAAGTGAGGGAGAGATTTCTAGTATCAAGGGTCCAATTGGAGCACAGCTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCATTTTGGGATTATATTAATTATTCCAAAGGGACATTCATGCTGTGTATGATCATGTTATCACAATCTGGTTTTATGGCTTTGCAAACTTCATCAACCTATTGGCTTGCTATTGCCATTGAAATTCCAAAAGTAACTAATGCCGCCTTGATTGGAGTTTATGCATTAATTTCTTTTTCTAGTGCTGCTTTTGTTTATGTAAGGTCTTACTTGACTGCACTTTTGGGATTAAAAGCTTCTACTGTTTTCTTCTCAAGCTTCACTACAGCTATCTTCAATGCTCCGATGCTTTTCTTTGATTCAACTCCTGTTGGAAGGATTTTGACAAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATCACCTTTGTAGCATCAATAGCAATTGAAGTTTTGGTCATAATTTGTGTAGTGGCTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATACGTTCAGCAATATTATCAAGCCACTGCAAGTGAACTAATACGGATCAACGGAACCACCAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTAGTTACAGTAAGATCATTCAACATGGTAGACAGATTTTTCAAAAACTACTTGAAACTTGTGGACACAGATGCTTCATTGTTCTTTCATTCAAATGGGGCCATGGAATGGGTGGTTTTAAGGATTGAAGCACTTCAAAACTTGACTGTCATCACTGCAGCTCTTTTGCTTATTCTACTTCCTCAGGGATATGTATCCCCAGGCCTTGTGGGGCTGTCTCTTTCTTATGCTTTTACTTTGACAGGAGCCCAAATATTTTGGAGTAGATGGTTTTCCAACTTATCAAACCATATTATCTCCGTTGAAAGAATCAACCAATTCATTCACATACCAGCTGAACCGCCTGCCATTGTGGATAATAACCGACCACCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGCTTAGAGATTAGATATCGTCCTAATAGTCCATTAGTACTTAAGGGAATCATTTGTACATTTAAAGAAGGAAGTAGGGTAGGAGTTGTTGGAAGGACTGGAAGTGGGAAAAGCACACTGATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATAGATGGGGTTAACATATGCTCAATCGGATTGAAGGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGAACAAACCTGGACCCTCTAGGCCTGTATTCAGATGATGAAATATGGAAGGCTGTAGAAAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAATCTCTTAGACTCTTCTGTGAGCGATGAAGGTGGAAATTGGAGCTTGGGACAAAGGCAATTGTTTTGCCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTTGTTCTGGATGAAGCAACAGCATCCATTGACTCTGCGACGGATGCAATTCTACAAAGAGTAATTAGACAAGAATTTTCAGAATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTTGTGGAATATGATGAGCCTTCAAAGCTAATGGATACAAACTCATCATTCTCTAAGCTGGTAGCTGAATATTGGTCTAGTTGCAGGAAGAGTTCCTCACAAAGATTATCAGGATGA 4365 0.3785 MAYFDNTIGEISWICLKNFDFNSLCSQRSLIDTINILFVCVYCTSLIITLIRKSSTNGSHGKCWIFIIVSICCGTISIAFFSIGLWDFIAKTDNSEKLSCIIKGLIWISLSVSLIVQRVKWIRILISIWWTFSCVLVSSLNIEILLRNHAIETFDIVQWLVHFLLLYCAFKNLDYIGTHSVQEGLTEPLLAGKNETKQTGLGRATFLSKLNFSWINSLLSLGYSKPLDLEDIPSVVSEDEADMSYQKFVNAWESLVRERTKNNTKSLVLWSIVRTFLKENILIAFYALIRTVSVAVSPLILYAFVNYSNRTEADLKQGLSIVGILILTKVFESLSQRHWFFNSRRSGMKMRSALMVAVYRKQLKLSSSARQRHSAGEIVNYIAVDAYRMGEFPWWFHTTWTCAFQLILSISVLFGVVGVGALPGLVPLLICGLLNVPFARILQNCQSQFMIAQDERLRSTSEVLNSMKIIKLQSWEEKFKNLVELLRDKEFVWLSKAQILKATNSFLYWMSPTVVSAVVFVGCAVTKSAPLNAETIFTVLATLRNMGEPVRMIPEALSILIQVKVSFDRLTNFLLDEELNNDDSERNIQQLSVNAVEIQDGNFNWDHESMSPTLKDVNLEIKWRQKIAVCGPVGAGKSSLLYAILGEIPKIQGTVNVGGTLAYVSQSSWIQSGTVQENILFGKPMDKRRYEKAIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVIQSGSYENLLTAGTAFEQLVRAHKDTITELNQDQENKEGSENEVLAKHQSEGEISSIKGPIGAQLTQEEEKVIGNVGWKPFWDYINYSKGTFMLCMIMLSQSGFMALQTSSTYWLAIAIEIPKVTNAALIGVYALISFSSAAFVYVRSYLTALLGLKASTVFFSSFTTAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASIAIEVLVIICVVASVTWQVLIVAVPAMVASIYVQQYYQATASELIRINGTTKAPVMNFAAETSLGVVTVRSFNMVDRFFKNYLKLVDTDASLFFHSNGAMEWVVLRIEALQNLTVITAALLLILLPQGYVSPGLVGLSLSYAFTLTGAQIFWSRWFSNLSNHIISVERINQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEIRYRPNSPLVLKGIICTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGVNICSIGLKDLRTKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRVIRQEFSECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKSSSQRLSG* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0456 1454 Gene3D - 593 826 IPR027417 -
Mtr8g0456 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 903 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0456 1454 CDD ABC_6TM_ABCC_D2 887 1180 IPR044726 GO:0140359
Mtr8g0456 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1207 1439 IPR003439 GO:0005524
Mtr8g0456 1454 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1450 - -
Mtr8g0456 1454 SMART AAA_5 623 796 IPR003593 -
Mtr8g0456 1454 SMART AAA_5 1231 1423 IPR003593 -
Mtr8g0456 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1195 1438 IPR027417 -
Mtr8g0456 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 281 562 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0456 1454 CDD ABC_6TM_ABCC_D1 282 570 IPR044746 GO:0140359
Mtr8g0456 1454 CDD ABCC_MRP_domain2 1203 1423 - -
Mtr8g0456 1454 Coils Coil 574 594 - -
Mtr8g0456 1454 MobiDBLite consensus disorder prediction 828 845 - -
Mtr8g0456 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 596 819 IPR003439 GO:0005524
Mtr8g0456 1454 SUPERFAMILY ABC transporter transmembrane region 876 1187 IPR036640 GO:0005524|GO:0016021
Mtr8g0456 1454 Pfam ABC transporter transmembrane region 282 542 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0456 1454 Pfam ABC transporter transmembrane region 924 1155 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g0456 1454 ProSitePatterns ABC transporters family signature. 721 735 IPR017871 GO:0005524
Mtr8g0456 1454 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 67 1450 - -
Mtr8g0456 1454 CDD ABCC_MRP_domain1 596 796 - -
Mtr8g0456 1454 SUPERFAMILY ABC transporter transmembrane region 269 576 IPR036640 GO:0005524|GO:0016021
Mtr8g0456 1454 Gene3D - 1188 1439 IPR027417 -
Mtr8g0456 1454 MobiDBLite consensus disorder prediction 828 848 - -
Mtr8g0456 1454 Gene3D ABC transporter type 1, transmembrane domain 858 1186 IPR036640 GO:0005524|GO:0016021
Mtr8g0456 1454 Gene3D ABC transporter type 1, transmembrane domain 256 578 IPR036640 GO:0005524|GO:0016021
Mtr8g0456 1454 Pfam ABC transporter 614 748 IPR003439 GO:0005524
Mtr8g0456 1454 Pfam ABC transporter 1222 1370 IPR003439 GO:0005524
Mtr8g0456 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 593 818 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0456 Mtr-Chr8 5265826 5272517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0456 583 841 Calmodulin-binding Proteins AT2G36910 25.357 3.70e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0456 - - gmx:100784827 2267.66