Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0436 ATGGCGACAGTACCAGGGCCACTCATATGGGAGATCGTGAAGAAGAACAACTCTTTCTTGGTGAAGGAGTTTGGAAACAACACTCAGAGTGTTCAATTCAGCAGAGAGAGTAACAATCTCTACAACCTTAACTCCTACAAATTCTCTGGTCTGGCAAACAAGAAAACTGTGACCATTCAGCCTGCTGGTAAAGATCAGTCAGTGTTGTTGGCTACAACAAAGCCAAGGAAGCAGAACAAGCCTTCTGCTTTGTCTCACAAATCTATCATGAAGAAGGAGTTCCGCAGGATGGCTAAGGCTGTTCAGAATCAGGTGTCAGATAATTACTACAGGCCTGATCTGAAGAAGGCAGCTCTTGCAAGGTTGAGTGCAGTTCATAGAAGCCTCAAAGTTGCCAAGTCCGGTGTCAAGAAGAGGAACAGACAGGCTTAG 432 0.4537 MATVPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSGLANKKTVTIQPAGKDQSVLLATTKPRKQNKPSALSHKSIMKKEFRRMAKAVQNQVSDNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQA* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0436 143 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Mtr8g0436 143 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 143 - -
Mtr8g0436 143 PANTHER 60S RIBOSOMAL PROTEIN L28 1 143 IPR002672 GO:0003735|GO:0005840|GO:0006412
Mtr8g0436 143 Gene3D - 7 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0436 Mtr-Chr8 5075578 5078018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0436 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.427 1.73e-73 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0436 K02903 - gmx:100499921 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0436 8 5075578 5078018 Mtr2g3518 2 49262106 49265400 ECH
Mtr8g0436 8 5075578 5078018 Mtr8g0436 8 5075578 5078018 ECH
Mtr2g3518 2 49262106 49265400 Mtr8g0436 8 5075578 5078018 PCT