Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0423 ATGGTTCCTAGTGAGATCAGAGGAGTCAATTATCTAACTCCTCCTGAGAATTCATTCCAAGTTCAACCAAACTTTGTCTTACCACAGAATGAAATTCCAAATTACCATATAAATAATCTTTTAGGCAGCTTACCAAACTTCCATTACCCATCATGTTTAAGCAGCAACTCAACTACTTCTGATGAAGCAGATGAACTTCAGTTTAACATCATCGATGAAAGGAAGCACCGACGAATGATATCAAACAGAGAATCAGCTAGGAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTTTGGTCACAAGTGATGAAACTCAGAACTGAAAATCACAACCTTGTTGACAAACTAAACCATGTGTCTGAGTCACATGACACAGTTGTTCAAGAGAATGCACGACTTAAAGAAGAAACTTTTGATCTTCGTCAAATGGTAGCTGACATGCAAATTGGTAACTCTTTTCCTTGCAACATGGAAGATTTATGTGAAATTCCATGCAACACATCTCAACACAAAGATGATTCCTCTAAAATTCATGATTGA 546 0.37 MVPSEIRGVNYLTPPENSFQVQPNFVLPQNEIPNYHINNLLGSLPNFHYPSCLSSNSTTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVMKLRTENHNLVDKLNHVSESHDTVVQENARLKEETFDLRQMVADMQIGNSFPCNMEDLCEIPCNTSQHKDDSSKIHD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0423 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 135 IPR004827 GO:0003700|GO:0006355
Mtr8g0423 181 PANTHER BZIP PROTEIN (ATBZIP48) 1 178 - -
Mtr8g0423 181 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
Mtr8g0423 181 CDD bZIP_plant_GBF1 75 126 IPR045314 GO:0003700|GO:0006355
Mtr8g0423 181 Pfam bZIP transcription factor 74 124 IPR004827 GO:0003700|GO:0006355
Mtr8g0423 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
Mtr8g0423 181 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 178 IPR044521 -
Mtr8g0423 181 Gene3D - 72 127 - -
Mtr8g0423 181 SUPERFAMILY Leucine zipper domain 74 124 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0423 Mtr-Chr8 4900266 4901923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0423 52 165 bZIP Transcription Factor Family AT3G30530 69.828 1.29e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g0423 bZIP_1 1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0423 - - gmx:100778078 267.314