Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0420 ATGGCCTCCTATTCATTTGACAGTGGAGCAAACAATAATGAGAATGTTACTGAATTTTCTTTTAGCATTGCTTGGTGTTCTTACTATTTGGTTTTGATACAAGCTCAGGATCAATCAGGATTCATCAGCATAGATTGTGGCCTACCTGAAAATTCAAACTACACTGAGAAGATCACAGGCATAAACTACATATCAGATGCAGAATTCATAGATACAGGTGTAAGTAAGAGTATATCACCTGCAGAGATGATTACTCATCAACAACAACTACATTTTGTACGGAGCTTTCCAAGTGGAGTTAGAAACTGTTACAGAATAAATGTAAACATGGGTGTTCAATATTTAATCAGAGCTACTTTCCTTTATGGAAACTATGATAATATAAATGAACCACCACAATTTGATCTTCATTTTGGACCTAATGTGTGGGATACGGTGTTGTTATCCAATGCATCACGCCCCACAATCAAGGAGATCATTTACATTCCATCAAAAGATTACATACAACCATGTCTTGTTAAAACAGGCAAAGGGACTCCATTCATTTCAACTATAGAATTGAGGACTTTGGGCAATGATTCTTATATCGGAGACTCAAAAAAACCAGTAATATTATCACACTTCATGAGATATGATTTAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATCTGGTCGCCTTATGAATCAAGTGATTGGAGACGATTAAGCACCTCACTTAACAATAATGCTCTAGCTCAAAATAGTTATAAACCACCAGCAATTGTGATGACCACAGCGGCTACACCAGTAAATGCTAGCGCCCCTTTACAATTTCATTGGTATGCAGATAGTGTAAATGATCAATACTACCTCTACTTGTACTTTAACGAGGTTGAGAAGCTGGCTGGAAATAAAACTAGAGCGTTCAATATCACACTGAATGACGAGTTTTGGTATGAACCTGTGGTGCCAGCTGTCATATATACTACAACACATATGACTGGAGCCAAAAGGTATCAATTTTCCCTTATTAAGACAGAGAATTCAACCCTTCCACCCATCCTCAATGCCTATGAGGTTTATAAAGTAAAACAATTCTTACAACCAGAAACTCAACAAGATGATGTTGATACTATCACAAACATCAAGAAGACTTATGGGGTGGCTAAAAATTGGCAAGGAGATCCATGTGGCCCTGTGAAGTATATATGGGAAGGCCTAAACTGCAGCGTTGATGGATATAACCCCCAAGAATCACATCTTTATGATAATCCTGATCTTTGTATGACGGCACCATGCAGAAAGAAAAATTTAACTGTACCACTTATTGCATCATTTTCTGCATTAATTGTTATCCTATTGATTTCTCTTGGATTTTGGATATTCAGAAGACAGAAAGTTACGTCTTCAAATTCTAAAAAAAGGGGTTCAATGATATCAAAGCATGAAAGATTCAGTTATACTGAAATTCTCAATATTACTGATAACTTCAAAACCATTCTTGGAGAAGGAGGTTTTGGAAAAGTTTACTTCGGCATTCTACAAGATCAAACTCAAGTAGCTGTTAAGAGGCTTTCGCTATCATCAATGCAAGGTTATAAGGAATTTCAATCAGAGGTTAGCCATTCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACACTTACAAGGTAATTCGGAAACTTCAAATATCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATGCAGCAAACGGATTGGATTATCTGCATAATGGATGCCAACCACCTATTATGCATAGAGATTTGAAGCCGTCCAACATATTACTAGATGATAACATGCATGCCAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGATAACGATATTGATTCTCAAATACTCACGCGCCCTGCTGGTACACTTGGTTATGCTGATCCTGAATATCAGCGAACGGGAAACACAAATAAAAAAAATGATATCTACAGCTTTGGGATAATTCTATTTGTGTTGATAACCGGGCGTCAAGCAATAGTAAGAGCAGCTGGAGAAAATATTCACATACTTGAATGGGTTATTCCCATAGTTGAAGGAGGAGATATTCAGAAAGTTGTTGATCCAAAGTTGGAGGGTAAATTTAGCATCAATTCATCAAGAAAATTTCTAGAGATTGCCAAATCATGCATTTCACCAACTTTAGCCGAAAGGCCGGACATAAGCCAAATATTGGCAGAACTGAAGGAGTGTTTATCTTTGGAGATGGTTCAGAGACACGAAGAAAGCGAAAACGATGTAATTGAAATGTCTTCTTCATCATTTCAATCAGTAACCGCCCCCTTTCCTAGGTAA 2346 0.3708 MASYSFDSGANNNENVTEFSFSIAWCSYYLVLIQAQDQSGFISIDCGLPENSNYTEKITGINYISDAEFIDTGVSKSISPAEMITHQQQLHFVRSFPSGVRNCYRINVNMGVQYLIRATFLYGNYDNINEPPQFDLHFGPNVWDTVLLSNASRPTIKEIIYIPSKDYIQPCLVKTGKGTPFISTIELRTLGNDSYIGDSKKPVILSHFMRYDLGSITNLEYRYKDDVYDRIWSPYESSDWRRLSTSLNNNALAQNSYKPPAIVMTTAATPVNASAPLQFHWYADSVNDQYYLYLYFNEVEKLAGNKTRAFNITLNDEFWYEPVVPAVIYTTTHMTGAKRYQFSLIKTENSTLPPILNAYEVYKVKQFLQPETQQDDVDTITNIKKTYGVAKNWQGDPCGPVKYIWEGLNCSVDGYNPQESHLYDNPDLCMTAPCRKKNLTVPLIASFSALIVILLISLGFWIFRRQKVTSSNSKKRGSMISKHERFSYTEILNITDNFKTILGEGGFGKVYFGILQDQTQVAVKRLSLSSMQGYKEFQSEVSHSLVYEYMANGNLQQHLQGNSETSNILKWNERLNIAVDAANGLDYLHNGCQPPIMHRDLKPSNILLDDNMHAKIADFGLSRAFDNDIDSQILTRPAGTLGYADPEYQRTGNTNKKNDIYSFGIILFVLITGRQAIVRAAGENIHILEWVIPIVEGGDIQKVVDPKLEGKFSINSSRKFLEIAKSCISPTLAERPDISQILAELKECLSLEMVQRHEESENDVIEMSSSSFQSVTAPFPR* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0420 781 SMART serkin_6 496 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0420 781 Gene3D Phosphorylase Kinase; domain 1 468 549 - -
Mtr8g0420 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Mtr8g0420 781 ProSiteProfiles Protein kinase domain profile. 496 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0420 781 MobiDBLite consensus disorder prediction 761 781 - -
Mtr8g0420 781 Pfam Protein kinase domain 537 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0420 781 MobiDBLite consensus disorder prediction 765 781 - -
Mtr8g0420 781 Gene3D Transferase(Phosphotransferase) domain 1 550 773 - -
Mtr8g0420 781 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Mtr8g0420 781 PANTHER OS07G0107800 PROTEIN-RELATED 544 774 - -
Mtr8g0420 781 PANTHER OS07G0107800 PROTEIN-RELATED 423 541 - -
Mtr8g0420 781 PANTHER OS07G0107800 PROTEIN-RELATED 29 418 - -
Mtr8g0420 781 SUPERFAMILY Protein kinase-like (PK-like) 477 745 IPR011009 -
Mtr8g0420 781 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 423 541 - -
Mtr8g0420 781 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 29 418 - -
Mtr8g0420 781 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 544 774 - -
Mtr8g0420 781 Pfam Malectin-like domain 44 364 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0420 Mtr-Chr8 4867877 4882109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0420 14 762 Receptor kinase-like Gene Family AT3G46330 39.549 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0420 Malectin_like 1.2e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0420 - - mtr:MTR_8g461120 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0420 8 4867877 4882109 Mtr8g0420 8 4867877 4882109 ECH