Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0417 ATGAAATCAAAGCATCAAATATTCAGTTACACCGAAATTCTCAATATTACTGATAACTTCAAAACAATTATTGGAGAAGGAGGATTTGGAAAAGTTTACATTGGCATTTTACAAGATCTCACTCAAGTTGCTGTTAAAATTCTTTCAACATCATCAAAGCAAGGTTATAAGGAATTTCAATCTGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATATTGCGATGAAGATGAAAACAAAGCATTGATTTATGAATACATGACAAATGGAAGTCTCCAACAACACTTATTTGATGATAATACACATATCTTAAAATGGAATGAGAGACTCAAAATTGCAGTTGATGCAGCACATGGATTGGAGTATCTTCATAATGGGTGTAATCTACCTATTATGCATAGAGATATGAAGCCTTCCAACATATTATTAGATGATAATATGCAGGCCAAAATAGCTGATTTTGGCTTAAGTAGAGCTTTTGCTAACGATGTTGATTCTCATATATCCACTCGTCCTGCTGGTACAAGAGGTTATATTGATCCTGAGTAA 570 0.3333 MKSKHQIFSYTEILNITDNFKTIIGEGGFGKVYIGILQDLTQVAVKILSTSSKQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEDENKALIYEYMTNGSLQQHLFDDNTHILKWNERLKIAVDAAHGLEYLHNGCNLPIMHRDMKPSNILLDDNMQAKIADFGLSRAFANDVDSHISTRPAGTRGYIDPE* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0417 189 ProSiteProfiles Protein kinase domain profile. 18 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0417 189 Pfam Protein kinase domain 21 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0417 189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mtr8g0417 189 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Mtr8g0417 189 PANTHER OS07G0107800 PROTEIN-RELATED 1 189 - -
Mtr8g0417 189 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
Mtr8g0417 189 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 1 189 - -
Mtr8g0417 189 Gene3D Transferase(Phosphotransferase) domain 1 94 189 - -
Mtr8g0417 189 SMART serkin_6 18 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0417 189 SUPERFAMILY Protein kinase-like (PK-like) 5 189 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0417 Mtr-Chr8 4819284 4821513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0417 8 189 Receptor kinase-like Gene Family AT2G19230 59.890 2.43e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0417 Pkinase 6.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0417 - - mtr:MTR_8g015190 328.946