Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0413 ATGCAACATATTCATGACAGATTAATTACAAAGAAAGAACCACCCCAGATGGTAACCTTAATGTTAAACTCCATCGTATTGCTTGCCTTGGTGCCATTTATTTGCATTACTCAAGCCAATTCTGAACAACTACACACACCTGTTTCAACAGAAATTGCTAACAATGAAAATCCTGGTTTTATAAGCATTGATTGTGGATCAGTAATCGATTACTTGCAAGAGGATACCGGAATTTGGTATAAGACAGACAAAGGGTTTGTGGAAACAGGAGAGAATCATGTGACTTCATCCACTATCAACTTAAACTATCTTTACTTTGGGAAACAATTAACCACGTTGAGATGTTTCCCAGAAGGAGATAGAAATTGTTACACATTGAAACCTAAAGAGGGTAAAAATAAAAAGTATATGATTCGTGCTTTCTTTTCATATGGAAATTATGATGGCAAAAATCAAACACAATCTTTTGATTTATATCTTGGAGTTGATCTTTGGAAAAAAATCAATTTCATTAATACTGTTGATTACTCTTACACGGAGATCATACACACTCCTTCATCTAACACTATAAATGTGTGCCTTGTAAAGACTGGTCCAACAATCCCTTGCATTTCATCATTGGAATTGAGACTTTTAAACAATTCCATTTATCAGAATCAACAGATAATCTCTACCACTGATCCACAACCTCTGTTGAAAATTGAAGCTAGGTTTGATGTTGGCCCCTCACCTTGTTCAAACAAACACGCTAGGTACAAAGATGATGTGTATGATCGGATATGGCTATGTGACCAATTCTTGTACGAAAATAATGATTGGTATCCATTGGGTTTGGATGAATCCATAAATATGGATCCAGAAATCAATAATGATGCTTATAAATTACCATCCAAAGTATTAAGGAGTACAGCCCAACCAAATAATGTGTCACACCCCTTGGGATTTATTTATGAATATACATATTCTCCACCCCTAGACAAAACATATGAATATTATGTCTATTTTCACTTCAATGAAATTGAGAAACTTTCAGGTGGTAAAAAAAGAAAAATAAACATCACAGTAAACTATAAACCTGTGCTCTCTCAGCCCTTAGTTCTTGATTACTTGAAACCTATTACACTCAACTACAAAACTCAAGGGGATGTTTGGTTCAACATTAGTGCAACCTCAGATTCTGATCTTCCTCCTGTGCTCAATGCTTTTGAGATTTATCAGTTCATAACCCAACTTGATTCACCAACAGACGCTCAAGATGTTGGAGCAATCATGGATATCAAAAGCTCCTATGAGGTGAATAAATTGAGTTGGCAAGGAGACCCATGTCTTCCTAAGCAATATGCATGGGAAGGTCTAGTTTGCAAAGGTGATACCATTCCAAGGATCACATCTTTGAACCTGAGCTCAAGCAAATTGACAGGGGAGATAAATATTTGGTTCTCGTATCTTACAGAACTAAAATTTCTGGATTTGTCAAACAACGAGTTGGAAGGGCCTTTGCCAGAATTTCTAGCACACTTGCCAAATTTAAAAGTTCTCAATCTAACGGGAAATAAGCTCTCTGGTTCGATTCCAAATGCTCTAAAGAAAAAGGCAGATTCAACTTTGCAATTAAGTGTGGATGACTATCTTGATACTTGTAACATGCGTTCGTGCAAAAAGAAGAACATTGTTGTACCAATTGTTGCATCACTTTCAGCATTAATTATAATCATATTGATCTCTCTCGGATTTTGGATATTCAAAAGACAAATAGTGGTGCCTTCTAATTCTAAGAACAAGGGTTCGCTGAAATCAAAACATCAAAGATTCAGTTATACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTATCTTGGCACTCTTCAAGATCAAACTCAAGTTGCTATTAAGATGCTTTCACCATCATCAATGCAAGGTTATAAAGAATTTCAATCAGAGGCACAACTTCTAACGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGGTATTGTGATGAAGGTGAAATTAAAGCATTGATTTATGAGTACATGGCCAATGGAAATCTACAACAACATTTATCAGTGGAAAATTCAAATGTCTTGAACTGGACTGAGAGACTCAACATTGCAGTTGATACAGCATATGGATTGGATTATTTACATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATACTACTAGACGAAAACTTGCATGCAAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAATGATGATGCTTCTCATATATCCACACGACCTGCTGGTACATTTGGTTACGCTGATCCTGAATTTCAACGATCAGGAAACACAAATAAGAAAAATGATATCTTTAGCTTTGGGATAATTCTATTTGAGTTGATCACCGGAAAGAAAGCACTTGAAAGATCATATGAAGAAAATATTCATATACTGCAATGGGTTGTTCCCATAATTAAAGCAGGAAATATTCAAAACATTATGGATTCGAGGTTGCAGGGTGAGTTCAGCATCAATTCAGCATGGAAAGTCGTTGAGATAGCCATGTCATGTGTTTCACAAAATGCTGTCGAGAGGCCGGACATTAACCAAATTTTGGTAGAGCTAAATGAATGTCTCTCTTTGGAGATGGTTCAGAGAAATAATGGAAGAGAAAGAGCTATAGTTGAAATTACTTCTGTAAATCTTGGATCACAAACTGCTCCTTTAGCTAGGTAA 2760 0.3572 MQHIHDRLITKKEPPQMVTLMLNSIVLLALVPFICITQANSEQLHTPVSTEIANNENPGFISIDCGSVIDYLQEDTGIWYKTDKGFVETGENHVTSSTINLNYLYFGKQLTTLRCFPEGDRNCYTLKPKEGKNKKYMIRAFFSYGNYDGKNQTQSFDLYLGVDLWKKINFINTVDYSYTEIIHTPSSNTINVCLVKTGPTIPCISSLELRLLNNSIYQNQQIISTTDPQPLLKIEARFDVGPSPCSNKHARYKDDVYDRIWLCDQFLYENNDWYPLGLDESINMDPEINNDAYKLPSKVLRSTAQPNNVSHPLGFIYEYTYSPPLDKTYEYYVYFHFNEIEKLSGGKKRKINITVNYKPVLSQPLVLDYLKPITLNYKTQGDVWFNISATSDSDLPPVLNAFEIYQFITQLDSPTDAQDVGAIMDIKSSYEVNKLSWQGDPCLPKQYAWEGLVCKGDTIPRITSLNLSSSKLTGEINIWFSYLTELKFLDLSNNELEGPLPEFLAHLPNLKVLNLTGNKLSGSIPNALKKKADSTLQLSVDDYLDTCNMRSCKKKNIVVPIVASLSALIIIILISLGFWIFKRQIVVPSNSKNKGSLKSKHQRFSYTEILNITDNFKTIIGEGGFGKVYLGTLQDQTQVAIKMLSPSSMQGYKEFQSEAQLLTIVHHRNLVSLIGYCDEGEIKALIYEYMANGNLQQHLSVENSNVLNWTERLNIAVDTAYGLDYLHNGCKPPIMHRDLKPSNILLDENLHAKIADFGLSRAFGNDDASHISTRPAGTFGYADPEFQRSGNTNKKNDIFSFGIILFELITGKKALERSYEENIHILQWVVPIIKAGNIQNIMDSRLQGEFSINSAWKVVEIAMSCVSQNAVERPDINQILVELNECLSLEMVQRNNGRERAIVEITSVNLGSQTAPLAR* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0413 919 ProSiteProfiles Leucine-rich repeat profile. 509 531 IPR001611 GO:0005515
Mtr8g0413 919 ProSiteProfiles Protein kinase domain profile. 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0413 919 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Mtr8g0413 919 Gene3D Phosphorylase Kinase; domain 1 586 689 - -
Mtr8g0413 919 CDD STKc_IRAK 620 885 - -
Mtr8g0413 919 Pfam Protein tyrosine and serine/threonine kinase 616 882 IPR001245 GO:0004672|GO:0006468
Mtr8g0413 919 SMART serkin_6 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0413 919 Pfam Leucine rich repeat 460 520 IPR001611 GO:0005515
Mtr8g0413 919 Gene3D Ribonuclease Inhibitor 419 541 IPR032675 -
Mtr8g0413 919 PRINTS Leucine-rich repeat signature 486 499 - -
Mtr8g0413 919 PRINTS Leucine-rich repeat signature 507 520 - -
Mtr8g0413 919 PANTHER OS07G0107800 PROTEIN-RELATED 50 914 - -
Mtr8g0413 919 Gene3D Transferase(Phosphotransferase) domain 1 690 908 - -
Mtr8g0413 919 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 50 914 - -
Mtr8g0413 919 Pfam Malectin-like domain 63 406 IPR024788 -
Mtr8g0413 919 SUPERFAMILY Protein kinase-like (PK-like) 597 883 IPR011009 -
Mtr8g0413 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Mtr8g0413 919 SUPERFAMILY L domain-like 446 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0413 Mtr-Chr8 4686713 4694902 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0413 52 919 Receptor kinase-like Gene Family AT2G19210 41.874 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0413 Malectin_like 3.8e-84 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0413 - - mtr:MTR_8g015040 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0413 8 4686713 4694902 Mtr8g0413 8 4686713 4694902 ECH