Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0409 ATGATAATCAATATCTTAGCATCTTTATCTTCTTTCAGTGTGGATGATAATCCTGATCTTTGTATGACGGAATCCTGTAAAAAGAAAAACTTTACTGTACAACTGGTTGCATCGTTTTCAGCATTAGTTGTAATCCTTTTGATTTCTTTTGGATTTTGGATATTCAGAAGACAAAAAGCTGTAGTTACGCCTTCAAATTCTAAGGAAAGGGGTTCAATGAAATCAAAACACCAAAATTTCAATTATTCTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCATTCTACAAGATCAAACTGAAGTCATTGTTAAGAGGCTTTCACCATCATCAATGCAAGGTTATAAGGAATTTCATTCGGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCCCCCTCCTTGGATATTGTGATGAAGGTCAAACCAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCAACACATTTTAGTAGAAAATTCAAATATCTTAAGTTGGAATGAGAGGCTTAACATTGCAGTTGACACAGCACATGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTAAAGCCTTCAAACATACTACTAGATGAGAACTTGCATGCAAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAACGATGATGATTCTCATATATCTACACGCCCTGCTGGTACATTTGGTTACGCTGATCCAGTGCAAGTGTATTATAAAAAATCAAATTAG 807 0.342 MIINILASLSSFSVDDNPDLCMTESCKKKNFTVQLVASFSALVVILLISFGFWIFRRQKAVVTPSNSKERGSMKSKHQNFNYSEILNITDNFKTIIGEGGFGKVYFGILQDQTEVIVKRLSPSSMQGYKEFHSEAQLLMIVHHRNLVPLLGYCDEGQTKALIYEYMANGNLQHILVENSNILSWNERLNIAVDTAHGLDYLHNGCKPPIMHRDLKPSNILLDENLHAKIADFGLSRAFGNDDDSHISTRPAGTFGYADPVQVYYKKSN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0409 268 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Mtr8g0409 268 SMART serkin_6 90 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0409 268 SUPERFAMILY Protein kinase-like (PK-like) 71 265 IPR011009 -
Mtr8g0409 268 Pfam Protein tyrosine and serine/threonine kinase 92 245 IPR001245 GO:0004672|GO:0006468
Mtr8g0409 268 Gene3D Phosphorylase Kinase; domain 1 71 165 - -
Mtr8g0409 268 ProSiteProfiles Protein kinase domain profile. 90 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0409 268 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 11 260 - -
Mtr8g0409 268 Gene3D Transferase(Phosphotransferase) domain 1 166 268 - -
Mtr8g0409 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mtr8g0409 268 PANTHER OS07G0107800 PROTEIN-RELATED 11 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0409 Mtr-Chr8 4648258 4650182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0409 11 268 Receptor kinase-like Gene Family AT2G19230 51.301 5.73e-86 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0409 PK_Tyr_Ser-Thr 7.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0409 - - mtr:MTR_8g014860 521.161