Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0403 ATGAAGCAAAAATTGATAGGAATGTTACTGCCTTTGCATTTTCTTTCAGTATTGTTTGGTGTCCTTACTACTTTGGTTTTGGTACAAGCTCAGGATCAATCAGGATTCATTAGCATAGATTGCGGTCTACCTCAAAAATCGAGCTATTCTGAGACGAGCACAGGCATAAGTTACATTTCAGATGCCAAATTCATAGACAGTGGTGTAAGTAAGAGGATACTACCTACAAGCAATACTGTTCTACAGCAACTGGAATATGTGAGGAGCTTTCCCAGTGGAGTGAAAAATTGTTACAAAATAGATGTAACCAATGGTACCAAATATTTAATCAGAGCTTCTTTCTATTATGGAAACTACGATGATTTAAATGAGCCACCACAATTTGATCTTCATTTTGGACCTAATGTTTGGGATACAGTAAAGTTCACAAATTTATCACGCATGACAATCAAGGAGATCATATACACTCCATCACTAGATTACATACAACCATGTCTTGTTAACACAGGCAAAGGGACTCCGTTCATTTCAGCCATAGAATTGAGGACTTTGGATAATAAAGCTTATGTCACATACGCAGCTAAATCATCAGTATTATCATACTTCTTTCGATTTGATTTAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTTAGATCGCATCTGGTATGCTTTTGAATGGAATGAGATGAAACGAATAAGCACCAAAGATGATATATTAATTCAGAATATTTATAAACCACCAGCAGTTGTGATGAGCACTGCTGTTACACCAGTAAATGCCAGTGCTCCTATACAATTTAGTTTCGATGCAGTTAATGTAAATGACCAATACTACATATATTTGCACATTACTGAATTTGAAAATCTGGCAGCAAATGAAAGTAGATCATTCAATATCACAGTGAATGGAATCCTTATGTACGGACCTGAGATACCTGTATACCGGTCAGTAGATAGCATATTCAGTACAATACCTTTGACTGGAGCGACAAAGTATATATTTACCCTTTCCAAGACAGATAATTCAACCCTTCCACCCATCCTGAATGCCGTTGAGGTTTATAAAGTAAAAAATTTCTCACAATCAGAAACTCAACAGGATGATGTTGATACTATGAGAAACATCAAGAAGGCCTATGGGGTGGCTAGAAATTGGCAGGGAGATCCATGTGGTCCAGTAAACTATATGTGGGAAGGCCTAAACTGCAGTCTTGATGGCAATAACATCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGAGAGATATCATCTTCCATATCAAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAAATGGTTCTTTACCTGATTTTCTGATGCAACTGCGTTCACTAAAAGTCTTAAACCTGGGGAAGAACAACCTTACGGGGTTAGTTCCAAGTGGACTTCTTGAGAGATCAAAAACAGGTTCATTATCACTGAGCGTGGATGATGATAACCTTGATCCTTGTATGACGGAATCTTGCAAAAAGAAGAACATTGCTGTACCACTTGTTGCATCGTTTTCAGCATTAGCTGTAATCCTTTTGATTTCTCTAGGATTTTGGCTATTCAGAAAACAAAAAAGACAAAAAGCTGTAGTTACGCCTTCAAATTCTAAGAAAAGGAGTTCAATGAAATCAAAACATCAAAAATTCAGTTACACTGAAATTGTCAATATTACCGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGACCAAACTCAAGTCGCTGTTAAGCGGCTTTCACCATCATCGATGCAAGGTTATAATGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCCTTGGATACTGTGATGAAACTGAAATCAAAGCATTGATTTATGAATACATGGCCAAAGGAAATCTCCAACAACATTTGTTAGTGGAAAATTCGAATATCTTAAATTGGAATGAGAGGCTTAACATTGCAGTTGACGCAGCACAAGGATTGGATTATCTGCATAATGGATGCAAACCACCGATCATGCATAGAGATTTGAAGCCTTCAAACATACTACTTGATGAGAACCTGAATGCAAAGATTGCTGATTTTGGTCTAAGTAAAGCTTTTGGTAACGATGATGATTCTCATATATCCACACGCCCTGCTGGTACATTTGGCTACGTTGATCCATTTCAGATACCAGGAAACACAAATAAGAAAAATGATATCTATAGCTTTGGTATAATTCTATTTGTGTTGATCACCGGGAAGAAAGCACTAGTGAGAGAATCTGGAGAAAGCATTCACATACTTCAATGGGTTATTCCTATTGTTAAAAGAGGAGATATTCAAAACATTGTTGATAAGAAGTTGCAGGGTGAATTCAACATCAGTTCTGCATGGAAAGTTGTTGAGATAGCCATGTCATGCATTTCACAAACTGTATCTGAAAGGCCAGACATAAGCCAAATATTGGCAGAGCTAAAGGAATGTCTCTCTTTGGACATGGTTCAGAGTAATAATGGAAGTATGAGAGCTAGAGATGAATTGGTTTCTATTGCGCTACATGTTTCAGAAACCACTATTTTAGCTAGATAA 2646 0.3677 MKQKLIGMLLPLHFLSVLFGVLTTLVLVQAQDQSGFISIDCGLPQKSSYSETSTGISYISDAKFIDSGVSKRILPTSNTVLQQLEYVRSFPSGVKNCYKIDVTNGTKYLIRASFYYGNYDDLNEPPQFDLHFGPNVWDTVKFTNLSRMTIKEIIYTPSLDYIQPCLVNTGKGTPFISAIELRTLDNKAYVTYAAKSSVLSYFFRFDLGSITNLEYRYKDDVLDRIWYAFEWNEMKRISTKDDILIQNIYKPPAVVMSTAVTPVNASAPIQFSFDAVNVNDQYYIYLHITEFENLAANESRSFNITVNGILMYGPEIPVYRSVDSIFSTIPLTGATKYIFTLSKTDNSTLPPILNAVEVYKVKNFSQSETQQDDVDTMRNIKKAYGVARNWQGDPCGPVNYMWEGLNCSLDGNNIPRITSLNLSSSGLTGEISSSISKLTMLQYLDLSNNSLNGSLPDFLMQLRSLKVLNLGKNNLTGLVPSGLLERSKTGSLSLSVDDDNLDPCMTESCKKKNIAVPLVASFSALAVILLISLGFWLFRKQKRQKAVVTPSNSKKRSSMKSKHQKFSYTEIVNITDNFKTIIGEGGFGKVYFGTLQDQTQVAVKRLSPSSMQGYNEFQSEAQLLMIVHHRNLVSLLGYCDETEIKALIYEYMAKGNLQQHLLVENSNILNWNERLNIAVDAAQGLDYLHNGCKPPIMHRDLKPSNILLDENLNAKIADFGLSKAFGNDDDSHISTRPAGTFGYVDPFQIPGNTNKKNDIYSFGIILFVLITGKKALVRESGESIHILQWVIPIVKRGDIQNIVDKKLQGEFNISSAWKVVEIAMSCISQTVSERPDISQILAELKECLSLDMVQSNNGSMRARDELVSIALHVSETTILAR* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0403 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Mtr8g0403 881 SUPERFAMILY Protein kinase-like (PK-like) 555 844 IPR011009 -
Mtr8g0403 881 PRINTS Leucine-rich repeat signature 441 454 - -
Mtr8g0403 881 PRINTS Leucine-rich repeat signature 462 475 - -
Mtr8g0403 881 Gene3D Transferase(Phosphotransferase) domain 1 652 866 - -
Mtr8g0403 881 Pfam Malectin-like domain 39 361 IPR024788 -
Mtr8g0403 881 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 24 877 - -
Mtr8g0403 881 ProSiteProfiles Protein kinase domain profile. 576 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0403 881 SUPERFAMILY L domain-like 372 485 - -
Mtr8g0403 881 CDD STKc_IRAK 582 846 - -
Mtr8g0403 881 PANTHER OS07G0107800 PROTEIN-RELATED 24 877 - -
Mtr8g0403 881 Pfam Protein tyrosine and serine/threonine kinase 578 844 IPR001245 GO:0004672|GO:0006468
Mtr8g0403 881 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Mtr8g0403 881 Gene3D Ribonuclease Inhibitor 374 494 IPR032675 -
Mtr8g0403 881 SMART serkin_6 576 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0403 881 Pfam Leucine rich repeat 415 475 IPR001611 GO:0005515
Mtr8g0403 881 Gene3D Phosphorylase Kinase; domain 1 548 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0403 Mtr-Chr8 4576918 4582040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0403 14 879 Receptor kinase-like Gene Family AT1G51800 43.258 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g0403 Malectin_like 4.9e-106 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0403 - - mtr:MTR_8g014700 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0403 8 4576918 4582040 Mtr8g0403 8 4576918 4582040 ECH