Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0398 ATGAAAAATTACGAAAATGAAGTTATCGCTGAAGAAGAAGAATGGTGTTCTGAAAATTTTGTAAATGATCAGGGTAATGAAGTTGATTTAGATTATGGGGCCGAGGCTGAAGGCAGTTGCAATAATGGACATTCTGATAGTGATAGTGATGAAGATGAACATGAAAACGGTTGTGGTGGCTGCACATTTGGTCAAAAAACAACAGTTGATGGTCCGGAATATATTGCAAAAGTTAATTTTACGCAAGTAAGTGTTGAAGATTTAATGTTGTTCCACTTTCCGGATGTTTCTGTGGCTTTCATGTTTTATAACTGGTATCCTAGCACCAAAGGATTTGCTGGTAGGAGGGATAGGGTAGTGAAAAATTGTAGGGGAGAAGTTACACAACAGACTTTTGTGTGCCATAGACAAGGTCACATAATGGAAAATGATAGGAATTATATTCGTAAAACGAAAGCCAAGCCTAAATCTAGGTGTGGTTGTGATGCAAGATGTCAGGTTCATGTGGATTCTAACTGTGGAAGGTGGTACATTAAGTTTATATGTGATGTGCACAACCATTCATTTGTAGACAAAGTTTTTAGTGGTATATGCTTCCAACACATAGGAAAATGA 615 0.3724 MKNYENEVIAEEEEWCSENFVNDQGNEVDLDYGAEAEGSCNNGHSDSDSDEDEHENGCGGCTFGQKTTVDGPEYIAKVNFTQVSVEDLMLFHFPDVSVAFMFYNWYPSTKGFAGRRDRVVKNCRGEVTQQTFVCHRQGHIMENDRNYIRKTKAKPKSRCGCDARCQVHVDSNCGRWYIKFICDVHNHSFVDKVFSGICFQHIGK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0398 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 196 - -
Mtr8g0398 204 Pfam FAR1 DNA-binding domain 102 190 IPR004330 -
Mtr8g0398 204 MobiDBLite consensus disorder prediction 34 56 - -
Mtr8g0398 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0398 Mtr-Chr8 4539118 4542252 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr8g0398 FAR1 1.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0398 - K17604 mtr:MTR_6g022080 143.665