Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0395 ATGGGAAAAGCTAGTAGATGGTTTAAGAGTTTGTTAGGAAACAAGAAGAAGGAGAAAGAGAAGGACCACAGTGACATCAATTCAGGTTCATTGACACCTGACATCAAAAAGGAGAAGAGAAGATGGAGTTTTGCAAAACAAGGGAAGAATGTTGAAGTGGAACCTCCTAACATTACTCCTACTTCATCTTCTGATGGTTCTTGGCTCAGATCCTATATTGCTGATACAGAAAATCAACAGAACAAACATGCAATTGCTGTTGCAGCTGCTACGGCGGCCGCTGCTGATGCTGCTGTGGCCGCCGCACAGGCTGCCGTGGCAGTTGTGAGGCTGACAAGTCAAGGTAGAGGTACATTGTTCAGTGGAAGTAGAGAGAAATGGGCTGCTGTAAAGATTCAAACTTTCTTCAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCATTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGCTATCTTGTTAGAAAAAGAGCTGCTGCAACTCTTCACAGTATGCAAGCTCTATTTAGAGCTCAAACTTCTGTCCGAACACAGAGAGCTCGCAGATCCATGAGCAAAGAAAGTAGATTTCTACCTGAAATTATTGCAAGAAAATCACTGGAACGATACGATGAAACAAGGAGCGAATTCCACAGCAAAAGACTACCAACATCTTATGAAACATCATTGAATGGATATGATGATCAAAGTCCAAAGATTGTTGAAATTGACACATGCAAAACTAGATCAAAATCTAGGAGATTTTCCTCAGCAATGTCTGAATGTGGAGAAGAATTACCACCTTTTCATGCACTTTCATCACCTATTCCTCCTGGTAGAATCTCAGTTCCTGATTGTAGAAATCATCATCAACACCAACAAGAATTTGATTGGTATTTCAACAATCTTGAAGAGTGTAGGTACCCTACAACACATAACACACCGCGTTTCAGTAATTCTTCTACGCGTCCTCCAAACACGCCATCAAAGAGTGTTTGCGGCGGTGACATCTTTAGACCTTATTATTACTCAAATTTTCCGAACTATATGGCTAATACTCAGTCATTTAAGGCAAAATTAAGGTCTCATAGTGCTCCTAAACAAAGACCTGAAGTCAAGAAAAGGCTTTCACTCAATGAAATGATGTCTGCGAGAAACAGTATCAGTGGTGTTAGAATGCAAAAACCTTCATCCAATTTTCAGACAAAACAAGAAGATGAAGAATCATGGAATTCTTGA 1245 0.404 MGKASRWFKSLLGNKKKEKEKDHSDINSGSLTPDIKKEKRRWSFAKQGKNVEVEPPNITPTSSSDGSWLRSYIADTENQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALFRAQTSVRTQRARRSMSKESRFLPEIIARKSLERYDETRSEFHSKRLPTSYETSLNGYDDQSPKIVEIDTCKTRSKSRRFSSAMSECGEELPPFHALSSPIPPGRISVPDCRNHHQHQQEFDWYFNNLEECRYPTTHNTPRFSNSSTRPPNTPSKSVCGGDIFRPYYYSNFPNYMANTQSFKAKLRSHSAPKQRPEVKKRLSLNEMMSARNSISGVRMQKPSSNFQTKQEDEESWNS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0395 414 MobiDBLite consensus disorder prediction 314 333 - -
Mtr8g0395 414 SMART iq_5 147 168 IPR000048 GO:0005515
Mtr8g0395 414 SMART iq_5 124 146 IPR000048 GO:0005515
Mtr8g0395 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 167 IPR027417 -
Mtr8g0395 414 Gene3D - 125 168 - -
Mtr8g0395 414 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 399 - -
Mtr8g0395 414 MobiDBLite consensus disorder prediction 385 414 - -
Mtr8g0395 414 MobiDBLite consensus disorder prediction 11 47 - -
Mtr8g0395 414 MobiDBLite consensus disorder prediction 1 64 - -
Mtr8g0395 414 PANTHER IQ-DOMAIN 5-RELATED 1 399 - -
Mtr8g0395 414 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Mtr8g0395 414 MobiDBLite consensus disorder prediction 314 331 - -
Mtr8g0395 414 Pfam IQ calmodulin-binding motif 152 166 IPR000048 GO:0005515
Mtr8g0395 414 Pfam IQ calmodulin-binding motif 127 146 IPR000048 GO:0005515
Mtr8g0395 414 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Mtr8g0395 414 Pfam Protein of unknown function (DUF4005) 317 397 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0395 Mtr-Chr8 4504145 4507602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0395 1 395 IQD Protein Family AT3G16490 53.563 3.07e-107 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0395 - - gmx:100797686 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0395 8 4504145 4507602 Mtr8g0395 8 4504145 4507602 ECH
Mtr2g3540 2 49429090 49431119 Mtr8g0395 8 4504145 4507602 PCT