Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0376 ATGCCGGTAATGCGTAGTGGAGCGCGCCGGGGACGGCCAACGAAGCGGCAATCTCAGAAGAAGCAGGAAGAGGAGAAGAAAACTCCAGTTGAAGTGGAGGCGGTTGCGACGAGAACGAGACGGCGGCGTGCAGCTGCAGCGGCGGCGGTTAAAGAGGAGCCGGCTGTTAAGGTAAATGATGACGTAGTTGCTGTTGTTGCCGTGGCGGAGAAGAAGGAGGAGGAGGAGGAAGCGGGTGGAGTGGAGAAGGAAATGATAGAGGAGAAACAGATGGAGGAATTTAATCGTGGTGGTCATAGCATTGATAAGGCTAATGCTGGTGAAGAAGATAGCAATGGCTTTGTTATTCCTGAAAAGGTTCAAGTTAGTACTTCTCCTTTGTATAAAACAGAGAAAAAACTTGGCAAGGGTGGATTTGGTCAAGTATATGTTGGTCGGCGTGTTTCTGATGGAAATTTGAATGAGAGAACTGGACCTGAAGCTTTAGAGGTGGCCATAAAATTTGAGCACACAAGTAGTAAAGGATGTAACGAAGGACCGCCAAAAGAGTGGGAAGCGTACGACACCCTCGGTGGAAGTCATGGTGTGCCACAGGTACATTACAAAGGCAAGCAAGATGGCTACTATATCATGATTATGGATATTCTAGGACCTAGCTTGTATGATGAATGGAATAATAAATCTCACTCTATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTATGTGCATGGAGATGTGAAGCCGGAAAATTTTCTGCTTGGCGCCTCTGGGACACCCGATGAGAAAAAATTGTTCCTGGTAGATCTTGGATTGGCTACTAAATGGCGGGATAGGACAACTGGTTTGCAAGTGGACTATGACCAAAGGCCTGATCTTTTCAGGGGCACAGTCCGCTATGCAAGTGTGCATGCGCATTTGGGGAGAAATGTAAGCAGGAGGGATGATTTGGAATCTCTTGCATATACATTGATTTTTCTTCTTCGAAGTCGTCTTCCTTGGCAAGGATACCAGGGAGAAAACAAAGGATATCAGGTTTGCAGGAAGAAGATGGGAACGTCTCCAGAGAACCTATGCTGTTTTTGTCCCCAGCCTTTTAAAGAGTTTGTTGAACATGTAGTGACCTTAAAGTATGATGAAGAGCCCAACTATGCAAAATACATTTCTCTATTTGATGGGATTATTGGTCCAAACCCAGACATTAGGCCACTGAATACAGAAGGTGCACAAAAGCTTGTTGGTCATAAAAGAGGCCGATTGGCTTCAGAAGATGATGATGAACAACCCAAAAAGAAGGTTCGAGTGGGTTTACCAGCGAACCAGTGGATTAGTGTTTACAATGCTCGTAGACCGATGAAACAAAGATATCACTACAATGTGTCAAGTACAAGACTATCACAGCACATTGACAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTTGCTTCATCTCAGGGCCTTTGGGCCTTAATAATGGATGCAGGGACAGGTTTCACTTCGCAAGTTTACGAATTCTCCCCCCAATTTTTCCATAAGGAATGGATCATGGAGCAGTGGGAAAAAAATTACTATATCACTGCAGTTGCAGGAATTGCAAATGGGAGTTCATTAGTAGTAATGTCTAAAGACACCCAGTATTCGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTCAAATGGATTAAAAAAAAGTGGGAGGAGAAATTTTTTGTAACTTCAATGGCCACAGCAGGGCCCAAATGGGGAGTAGTTATGTCTAAAGGGGCAGGGTTTTCAAAACAGGCGGTCGAATTAGATTTTCTGTACCCTAGTGAAGGGATTCACAAGCGGTGGGAGTCTGGTTACCGAATCACATCGACTGCGGCAACTTGGGACCAAGCTGCTTTTGTTCTGAGTATTCCAGAGAATAAGCTGCAGGACGAAACTCAAGAAACACTAAGGACTACTACTTTTCCTAGTACTCATGTTAAGGAGAAGTGGGCTAAGAACCTCTACATTGCCTCTATTTGCTATGGACGCACTGTTTCTTGA 2076 0.4436 MPVMRSGARRGRPTKRQSQKKQEEEKKTPVEVEAVATRTRRRRAAAAAAVKEEPAVKVNDDVVAVVAVAEKKEEEEEAGGVEKEMIEEKQMEEFNRGGHSIDKANAGEEDSNGFVIPEKVQVSTSPLYKTEKKLGKGGFGQVYVGRRVSDGNLNERTGPEALEVAIKFEHTSSKGCNEGPPKEWEAYDTLGGSHGVPQVHYKGKQDGYYIMIMDILGPSLYDEWNNKSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGASGTPDEKKLFLVDLGLATKWRDRTTGLQVDYDQRPDLFRGTVRYASVHAHLGRNVSRRDDLESLAYTLIFLLRSRLPWQGYQGENKGYQVCRKKMGTSPENLCCFCPQPFKEFVEHVVTLKYDEEPNYAKYISLFDGIIGPNPDIRPLNTEGAQKLVGHKRGRLASEDDDEQPKKKVRVGLPANQWISVYNARRPMKQRYHYNVSSTRLSQHIDKGNEDGLYISSVASSQGLWALIMDAGTGFTSQVYEFSPQFFHKEWIMEQWEKNYYITAVAGIANGSSLVVMSKDTQYSQQSYKVSDSFPFKWIKKKWEEKFFVTSMATAGPKWGVVMSKGAGFSKQAVELDFLYPSEGIHKRWESGYRITSTAATWDQAAFVLSIPENKLQDETQETLRTTTFPSTHVKEKWAKNLYIASICYGRTVS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0376 691 ProSiteProfiles Protein kinase domain profile. 128 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0376 691 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 79 666 - -
Mtr8g0376 691 MobiDBLite consensus disorder prediction 17 39 - -
Mtr8g0376 691 PANTHER CASEIN KINASE-RELATED 79 666 - -
Mtr8g0376 691 SUPERFAMILY Protein kinase-like (PK-like) 128 410 IPR011009 -
Mtr8g0376 691 CDD STKc_CK1 128 404 - -
Mtr8g0376 691 ProSitePatterns Protein kinases ATP-binding region signature. 134 167 IPR017441 GO:0005524
Mtr8g0376 691 Coils Coil 71 91 - -
Mtr8g0376 691 SMART serkin_6 128 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0376 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Mtr8g0376 691 Gene3D Transferase(Phosphotransferase) domain 1 86 447 - -
Mtr8g0376 691 MobiDBLite consensus disorder prediction 1 39 - -
Mtr8g0376 691 Pfam Protein kinase domain 128 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0376 Mtr-Chr8 4263359 4269675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0376 225 404 MAP Kinase Kinase Kinase AT5G50180 26.374 1.99e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mtr8g0376 Pkinase 4.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0376 - - gmx:100799630 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0376 8 4263359 4269675 Mtr8g0376 8 4263359 4269675 ECH