Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0370 ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGTGAAAACCAATTCTCGCCGGAGAAACGTCACGGTGACCAGAAACCACCGTGTGAGCCTTTCGCCATTGATGATTTACTTGATTTTTCAAATGCTGATGTGATTATGTCTGACGGTTTCTTCGATAACAATGTCGCCGGAAATTCCACCGACTCTTCCAATGTCACCGCTGTTGACAGCTGTAACTCGTCTGGCTCTGGTGGTGATAACCGCTTTGGAGGCACAATTGTTCCTTATGGTTTTTCCGGTGATGTTCAACTCACCGGTGAACTCTGTGTTCCGTATGATGATATGGCGGAACTGGAATGGCTTTCGAATTTCGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACATTGCAACTTCTCTCCGGCGCCGGTGCGGTTAAACCGCAAACACCGGAATCTTCATCTTCCACCGACACACTTCCGTCATTTTCCACTGACGAAACCGCTCGTAACGCTTCATTTCTCCGTCCAGAAACACCTCTACCAGGAAAAGCACGTAGCAAACGCTCACGCGCTGCACCTGGCGACTGGTCCACGCGCCTACTTCATCTCCCCGACGCGCCACCCAAAAATTATCCAATTGTGAAGAAGCGTGAGGATCCGAATGTGGAATGTTCTGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACGCCGCAGTGGAGAACAGGACCGATGGGACCGAAAACACTATGCAATGCTTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCAGCGGCGAGTCCAACTTTTGTATCGGCGAAGCATTCGAATTCTCATAGGAAAGTTTTGGAACTTCGAAGACAAAAAGAGATGCAAAGATCATCACAGCATCATCATCATCATCAACATCAACAGCTTCTGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGTTATCTAG 1029 0.4781 MEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADVIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGGDNRFGGTIVPYGFSGDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKNYPIVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHQHQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHVI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0370 342 PANTHER GATA TRANSCRIPTION FACTOR 9 1 342 - -
Mtr8g0370 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 225 285 - -
Mtr8g0370 342 SMART GATA_3 222 272 IPR000679 GO:0006355|GO:0043565
Mtr8g0370 342 Gene3D - 223 310 IPR013088 GO:0006355|GO:0008270
Mtr8g0370 342 ProSitePatterns GATA-type zinc finger domain. 228 253 IPR000679 GO:0006355|GO:0043565
Mtr8g0370 342 MobiDBLite consensus disorder prediction 143 213 - -
Mtr8g0370 342 PANTHER GATA TRANSCRIPTION FACTOR 1 342 - -
Mtr8g0370 342 MobiDBLite consensus disorder prediction 145 170 - -
Mtr8g0370 342 ProSiteProfiles GATA-type zinc finger domain profile. 222 258 IPR000679 GO:0006355|GO:0043565
Mtr8g0370 342 Pfam GATA zinc finger 228 261 IPR000679 GO:0006355|GO:0043565
Mtr8g0370 342 CDD ZnF_GATA 227 274 IPR000679 GO:0006355|GO:0043565
Mtr8g0370 342 MobiDBLite consensus disorder prediction 291 311 - -
Mtr8g0370 342 PIRSF Txn_fac_GATA_plant 21 318 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0370 Mtr-Chr8 4209725 4211278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0370 33 342 C2C2-Gata Transcription Factor Family AT4G32890 48.308 1.82e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mtr8g0370 GATA 6.9e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0370 - - cam:101510199 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0370 8 4209725 4211278 Mtr8g0370 8 4209725 4211278 ECH