Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0357 ATGGCTTTTCTAATTCACAACACAAACCACTTCTTCATAATTACGTTCATCATATTTAGCACCTTTTATTCATGTTATAGTTCTACCAACGACACCATTACATCATCTAAATCACTCAAAGACAACGAAACAATAACCTCAAACAACACAAATTTCAAGCTAGGATTTTTCAGCCCATTAAATTCAACCAACCGTTACCTAGGAATTTGGTACATCAATGAGACCAACAATATATGGATTGCAAACAGAGATCAACCACTCAAGGATTCAAATGGAATAGTCACAATTCACAAAAATGGAAATCTTGTAATATTGAACAAAGAAAATGGTAGCATCATTTGGTCAACAAGCATTTCAAGTCCAAATTCAATAAATTCCACAGCTCAACTTGTTGATGTAGGAAACTTGATTCTAAGTGACATCAATTCTAGATCAACAATTTGGGATAGTTTCACTCACCCTGCGGATGCCGCTGTTCCAACGATGAGAATTGCATCTAATAAAGCAACGGGGAAGAATATATCTTTTGTATCAAGAAAAAGTGAAAATGATCCTTCTTCAGGACATTATATAGGAAGTCTTGAAAGATTGGATGCACCAGAAGTTTTTATTTGGTATGATAAGAGAATTCATTGGAGAACTGGTCCATGGAATGGAACGGTTTTTCTCGGATCACCGAGAATGTTAACCGAGTATTTAGCCGGTTGGCGTTTTGATCAAGACAAAGATGGAACTACTTATCTAACTTATGATTTCGCCGTCAAAGCTATGTTTGGAATTCTCTCATTGACACCAAATGGAACACTTAAGTTGGTTGAGTTTTTGAATAATAAGGAATTTCTATCACTTACGGTTAGTCAAAACGAGTGTGATTTTTATGGAAAATGTGGGCCATTTGGAAATTGTGATATTTCTAGTGTACCAAATATTTGTAGTTGTTTTAAAGGGTTTGAGCCAAAGAATTTGGTGGAGTGGAGTTCAAGGAATTGGACTAATGGTTGTGTGAGGAAAGAAGGAATGAACTTGAAGTGTGAGATGGTGAAGAATGGATCAAGCGTAGTTAAACAAGATAAATTTTTGGTGCATCCCAATACGAAACCTCCTGATTTTGCTGAGAGATCAGATGTTAGTCGAGATAAGTGTAGAACAGATTGTTTGGCAAATTGTTCTTGTTTGGCTTATGCATATGATCCTTTTATACGTTGTATGTATTGGAGTAGTGAGTTAATTGATTTGCAGAAATTTCCTACTAGCGGAGTTGATCTCTTCATTCGTGTTCCAGCAGAACTAGTTGAAAAGGAAAAAGGGAACAAGAGTTTTTTAATCATTGCAATTGCCGGGGGTTTAGGAGCATTTATCTTGGTTATATGTGCTTATCTTTTGTGGAGGAAATGGTCTGCTAGGCATACAGGAAGACAACCTCGAAACTTGATTACCAAAGAACAAAAGGAAATGAAATTGGATGAGCTACCACTATATGATTTTGTAAAGCTCGAAAATGCTACAAACAGTTTTCACAATAGTAATATGCTTGGGAAGGGAGGTTTTGGCCCTGTATACAAGGGAATACTGGAAGATGGCCAAGAAGTTGCTGTAAAAAGACTCTCAAAATCATCTGGACAAGGAATAGAAGAATTTATGAATGAAGTAGCAGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGCTGTGTTGAAAGAGGAGAGCAAATGTTGGTTTATGAGTTCATGCCAAATAAGAGTCTGGATGCCTTTCTCTTTGATCCATTGCAAAAGAAAAATTTAGATTGGAGAAAGCGGTTAAACATAATTGAAGGCATAGCTCGAGGTATACTTTATCTTCATAGAGACTCGAGGCTAAGGATTATACATCGGGATTTAAAAGCAAGCAACATCTTACTTGATGGGGAGATGGTTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGAGGAGAAGATGATGAAACAAACACAAATAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAAGGACTTTTTTCTGAGAAATCAGATGTTTATAGCTTTGGAGTTTTATTGTTAGAGATTGTTAGCGGCCGAAGAAACAGTAGCTTTTACCACAACGAAGATTCTCTTAGCCTTGTTGGCTTTGCATGGAAGCTATGGTTAGAAGAAAACATTATATCTCTAATAGATCGAGAGGTTTGGGATGCATCTTTTGAGAGCAGCATGTTGAGGTGCATACACATAGGACTTCTCTGTGTGCAAGAACTTCCAAGAGACAGACCAAATATATCAACAGTTGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAGGAAAAGTTGCATTTGTCCACAAGAAAAATTCCAAGAGTGGAGAATCTTCTCAAAAAAGTCAACAATCTAACTCAAACAACAGTGTAACTCTGAGTGAAGTCCAAGGCAGGTAA 2475 0.3681 MAFLIHNTNHFFIITFIIFSTFYSCYSSTNDTITSSKSLKDNETITSNNTNFKLGFFSPLNSTNRYLGIWYINETNNIWIANRDQPLKDSNGIVTIHKNGNLVILNKENGSIIWSTSISSPNSINSTAQLVDVGNLILSDINSRSTIWDSFTHPADAAVPTMRIASNKATGKNISFVSRKSENDPSSGHYIGSLERLDAPEVFIWYDKRIHWRTGPWNGTVFLGSPRMLTEYLAGWRFDQDKDGTTYLTYDFAVKAMFGILSLTPNGTLKLVEFLNNKEFLSLTVSQNECDFYGKCGPFGNCDISSVPNICSCFKGFEPKNLVEWSSRNWTNGCVRKEGMNLKCEMVKNGSSVVKQDKFLVHPNTKPPDFAERSDVSRDKCRTDCLANCSCLAYAYDPFIRCMYWSSELIDLQKFPTSGVDLFIRVPAELVEKEKGNKSFLIIAIAGGLGAFILVICAYLLWRKWSARHTGRQPRNLITKEQKEMKLDELPLYDFVKLENATNSFHNSNMLGKGGFGPVYKGILEDGQEVAVKRLSKSSGQGIEEFMNEVAVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFDPLQKKNLDWRKRLNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGEMVPKISDFGLARIVKGGEDDETNTNRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHNEDSLSLVGFAWKLWLEENIISLIDREVWDASFESSMLRCIHIGLLCVQELPRDRPNISTVVLMLISEITHLPPPGKVAFVHKKNSKSGESSQKSQQSNSNNSVTLSEVQGR* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0357 824 Pfam PAN-like domain 355 412 IPR003609 -
Mtr8g0357 824 CDD B_lectin 36 154 IPR001480 -
Mtr8g0357 824 SMART ntp_6 354 426 IPR003609 -
Mtr8g0357 824 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Mtr8g0357 824 MobiDBLite consensus disorder prediction 802 824 - -
Mtr8g0357 824 SMART blect_4 36 154 IPR001480 -
Mtr8g0357 824 CDD STKc_IRAK 511 777 - -
Mtr8g0357 824 SUPERFAMILY Protein kinase-like (PK-like) 490 804 IPR011009 -
Mtr8g0357 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 219 IPR036426 -
Mtr8g0357 824 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Mtr8g0357 824 CDD PAN_AP_plant 356 427 - -
Mtr8g0357 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Mtr8g0357 824 Gene3D - 24 153 IPR036426 -
Mtr8g0357 824 PIRSF SRK 2 824 IPR024171 GO:0004674
Mtr8g0357 824 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0357 824 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Mtr8g0357 824 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Mtr8g0357 824 Pfam D-mannose binding lectin 78 180 IPR001480 -
Mtr8g0357 824 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 823 - -
Mtr8g0357 824 Gene3D Phosphorylase Kinase; domain 1 478 580 - -
Mtr8g0357 824 SMART serkin_6 505 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0357 824 MobiDBLite consensus disorder prediction 792 824 - -
Mtr8g0357 824 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Mtr8g0357 824 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 20 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0357 Mtr-Chr8 4053658 4059276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0357 453 819 Receptor kinase-like Gene Family AT4G23150 52.589 3.11e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g0357 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0357 - - mtr:MTR_8g013600 1253.43