Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0355 ATGTTCATGGCTTTTCTAAGTCATAACAAAAACCACTTGTTCATAACATTCCTCATATTTTGCACATTTTATTCATGTTATAGTGCTGTCAACGACACTATTACATCATCCAAATTACTCAAAGACAATGAAACAATAACCTCAAACAACACAGACCTCAAGCTAGGATTTTTCAGCCCATTAAATTCGCCCAACCGTTACTTAGGAATTTGGTACATCAATGAGACCAACAACATATGGATTGCAAACAGAGATCAACCACTCAAAGATTCAAATGGAATTGTCACAATTCACAAAAATGGAAATCTTGTAATTTTGAACAAACCAAATGGCAGCATCATTTGGTCAACAAACATTTCATCTTCAACAAATTCAACAGCTAAACTTGATGATGCAGGGAACTTGATTCTAAGAGACATCAATTCTGGAGCAACAATCTGGGATAGTTTCACACACCCTTCAGATTCAGCTGTTCCATCGATGAAAATTGCATCTAACAAAGTTACAGGTAAGCAAATTGCTTTTGTAGCAAGAAAAAGTGACAATGATCCTTCTTCGGGACATTTTACAATTAGTGTTGAAAGATTGGATGTACCAGAAGTTTTCATTTGGAAAGATAAAAAAATTTATTGGAGAACTGGTCCATGGAATGGAAGAGTTTTTCTCGGAACGCCAAGATTGTCAACCGAATATCTATTTGGTTGGCGTTTAGGTGTCGACGATGATGGAACCACTTTTATAACTTATAATTTCGCCGACAAAACTATGTTTGGAATTCTCTCATTGACACCACATGGGACACTTAAGTTGATTGAGTATAAGAATAAAAAGGAACTTTTTAGACTTGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCATTTGGAAATTGTGATAATTCTAGTGTACCAATTTGTAGTTGTTTTGATGGGTTTCAGCCAAAGAATTCGGTGGAGTGGAGTTTAGGAAATTGGACTAATGGTTGTGTGAGAACAGAAGGATTGAACTTGAAGTGTGAGATGGTGAAGAATGGATCAAATCTAGTGAAACAAGATGCATTTTTGGTGCATCATAATATGAAACCTCCTGATTTTAATGAGAGATCAGCTGGTAATCAAGATAAATGTGGAACAGATTGTTTGGCAAATTGTACTTGTTTGGCATATGCATATGATCCTTCTATAGGTTGTATGTATTGGAGTAGCGAGTTAATTGATTTGCAGAAATTTCCTACCGGCGGAGTTGATCTCTTCATTCGTGTGCCGGCAGAACTTGTTGCGGTTACTAAAAAGGAAAAAGGGCGTAACAAGAGTGTTTTAATCATTGCCATTGCTGGGGGGATAGGAGCATGTACTTTGGCTATATGTGCTTATCTTTTGTGGAGAAAATGTTCAACCAGGCATAGAGGAAGTAAGTCTCAAAACTTGATTAATAGAGAACAAAACCAAATGAAAATAGATGAGCTACCAGTGTATGAGTTCGCAAAGCTTGAAGCTGCCACAAACAACTTTCACTTTGGAAATATTCTTGGGAAGGGAGGTTTTGGTCCTGTATACAAGGGAATAATGCAAGATGGCCAAGAAATTGCCGTGAAAAGACTCTCGAAGTCATCAGGACAAGGAATAGAAGAATTCATGAACGAAGTAGTAGTGATTTCTAAACTTCAACATCGAAATCTCGTAAGACTTCTAGGTTGTTGTGTTGAAAGAGGAGAGCAAATGTTGGTTTATGAGTTCATGCCAAACAAAAGTTTGGATGCATTCCTCTTTGATCCGCTACAAAAGAAAAACTTAGATTGGAAAAAGCGGTCAAACATAATAGAAGGGATAGCTCGAGGTATAATGTATCTTCATAGAGACTCAAGACTAAGGATTATACATAGAGATTTAAAAGCCAGCAACGTCTTACTTGATGGCGACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAATTTGGAGAAGATGATGAAGCTAACACAAAAAGGGTTGTTGGAACTTATGGTTATATGCCACCTGAATATGCAATGGAGGGGCTTTTCTCAGAGAAATCAGATGTCTATAGTTTCGGAGTTTTATTGCTAGAGCTTGTTAGTGGACGAAGAAATAGTAGCTTTTATCACAGCGAGGATTCTCTTAGCCTTGTAGGCTTTGCATGGAAGCTATGGTTAGAAGAAAACATTATATCTCTAATAGATCCAGAGGTTTGGGATGCATCTTTTGAGAGTAGCATGTTAAGGTGCATACACATAGGACTTCTTTGTGTGCAAGAACTTCCAAAAGAAAGACCAAGTATATCAACCGTAGTTTTGATGCTTATAAGTGAGATCACACATCTTCCACCTCCTGGTAAAGTTGCATTTGTTCACAAGCAAAATTCTCGAAGTACAGAATCTTCTCAACAAAGTCATCGATCTAACTCAAACAACAATGTAACCATGAGCGATGTCACAGGCAGGTAA 2481 0.3712 MFMAFLSHNKNHLFITFLIFCTFYSCYSAVNDTITSSKLLKDNETITSNNTDLKLGFFSPLNSPNRYLGIWYINETNNIWIANRDQPLKDSNGIVTIHKNGNLVILNKPNGSIIWSTNISSSTNSTAKLDDAGNLILRDINSGATIWDSFTHPSDSAVPSMKIASNKVTGKQIAFVARKSDNDPSSGHFTISVERLDVPEVFIWKDKKIYWRTGPWNGRVFLGTPRLSTEYLFGWRLGVDDDGTTFITYNFADKTMFGILSLTPHGTLKLIEYKNKKELFRLEVDQNECDFYGKCGPFGNCDNSSVPICSCFDGFQPKNSVEWSLGNWTNGCVRTEGLNLKCEMVKNGSNLVKQDAFLVHHNMKPPDFNERSAGNQDKCGTDCLANCTCLAYAYDPSIGCMYWSSELIDLQKFPTGGVDLFIRVPAELVAVTKKEKGRNKSVLIIAIAGGIGACTLAICAYLLWRKCSTRHRGSKSQNLINREQNQMKIDELPVYEFAKLEAATNNFHFGNILGKGGFGPVYKGIMQDGQEIAVKRLSKSSGQGIEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDAFLFDPLQKKNLDWKKRSNIIEGIARGIMYLHRDSRLRIIHRDLKASNVLLDGDMIPKISDFGLARIVKFGEDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLELVSGRRNSSFYHSEDSLSLVGFAWKLWLEENIISLIDPEVWDASFESSMLRCIHIGLLCVQELPKERPSISTVVLMLISEITHLPPPGKVAFVHKQNSRSTESSQQSHRSNSNNNVTMSDVTGR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0355 826 Pfam D-mannose binding lectin 79 179 IPR001480 -
Mtr8g0355 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Mtr8g0355 826 Gene3D - 25 152 IPR036426 -
Mtr8g0355 826 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Mtr8g0355 826 CDD STKc_IRAK 513 779 - -
Mtr8g0355 826 SMART blect_4 37 153 IPR001480 -
Mtr8g0355 826 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Mtr8g0355 826 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Mtr8g0355 826 SMART serkin_6 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0355 826 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0355 826 Pfam PAN-like domain 353 410 IPR003609 -
Mtr8g0355 826 SUPERFAMILY Protein kinase-like (PK-like) 492 815 IPR011009 -
Mtr8g0355 826 MobiDBLite consensus disorder prediction 797 826 - -
Mtr8g0355 826 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Mtr8g0355 826 Gene3D Phosphorylase Kinase; domain 1 467 582 - -
Mtr8g0355 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 824 - -
Mtr8g0355 826 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 20 824 - -
Mtr8g0355 826 SMART ntp_6 352 424 IPR003609 -
Mtr8g0355 826 PIRSF SRK 3 826 IPR024171 GO:0004674
Mtr8g0355 826 Pfam Protein tyrosine and serine/threonine kinase 508 776 IPR001245 GO:0004672|GO:0006468
Mtr8g0355 826 CDD PAN_AP_plant 354 425 - -
Mtr8g0355 826 CDD B_lectin 37 153 IPR001480 -
Mtr8g0355 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 218 IPR036426 -
Mtr8g0355 826 Gene3D Transferase(Phosphotransferase) domain 1 583 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0355 Mtr-Chr8 4036543 4040893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0355 432 816 Receptor kinase-like Gene Family AT4G05200 51.523 1.56e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g0355 PK_Tyr_Ser-Thr 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0355 - - mtr:MTR_8g013600 1576.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0355 8 4036543 4040893 Mtr8g0355 8 4036543 4040893 ECH