Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0354 ATGGCTTTTCTAAGTCATAATATAAATGACTTATTCATTACATTCCTCATATTTTGCACATTTTATTCATGTTATAGTTCTACCAACAACGCCATTACATCATCAAAATCACTCAAAGACAATGAAACAATAACCTCAAACAACACAGACCTCAAGCTAGGATTTTTCAGCCCATTAAATTCGAACAACCGTTACTTAGGAATTTGGTACATCAATGAGACCAACAACATATGGATTGCAAACAGAGATCAACCACTCAAAGATTCAAATGGAATTGTCACAATTCACAAAGATGGAAATCTTGTAATATTGAACAAACCAAATGGTATCATCATTTGGTCAACAAACATTTCATCTTCAACAAATTCAACAGCTAAACTTGATGATGCAGGGAACTTGATTCTAAGAGACATCAATTCTGGAGCAACAATCTGGGATAGTTTCACACACCCTGCAGATTCAGCTGTTCCATCGATGAAAATTGCATCTAATAAAGTTACAGGTAAGCAAATTGCTTTTGTAGCAAGAAAAAGTGACAATGATCCTTCTTCGGGACATTTTACAATTAGTGTTGAAAGATTGGATGTACCAGAAGTTTTCATTTGGAAAGATAAAAAAATTTATTGGAGAACTGGTCCATGGAATGGAAGGGTTTTTCTCGGAACGCCAAGATTGTCAACCGAATATCTATTTGGTTGGCGTTTAGGTGTCGACGATGATGGAACCACTTTTATAACTTATAATTTCGCCGACAAAACTATGTTTGGAATTCTCTCATTGACACCACATGGGACACTTAAGTTGATTGAGTATAAGAATAAAAAGGAACATTTTAGACTTGAGGTGGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCATTTGGAAATTGTGATAATTCTAGTGTACCAAATATTTGTAGTTGTTTTAAAGGGTTTGAGCCAAAGAATTTGGTGGAATGGAGTTCAAGGAATTGGACTAATGGTTGTGTGAGGACAGCAGGAATGAACTTGAAGTGTGAGATGTTGAAGACCGGATCAAATGAATTTAAACAAGATGGTTTTTTGGTGAATCGGAATATGAAAGTTCCTGATTTTAATGAGAGATCAGCTGGTAATCAAGATAAATGTAGAACAGATTGTTTGGTAAATTGTTCTTGTTTGGCATATGCATATGATCGTTATATAGGTTGCGTGTATTGGAGTGGAGACTTAATTGGTTTGCAAAACTTTCCTCATGGAGGAGTTGATCTCTTCATCCGTGTCCCGGCAGAACTTGTTAAAAAGGAAAAGGGGCACAAGAAGGGTTTTTTAATCATTTCAATTGCTGGGGGCACGGGAGCATTTACTTTGGTTGTATGTGCTTATCTTTTGTGGCTAAGACGTTCTGCTAGGCATAAAGGAAGACAATCTCGAAACTTGACTACTAGAGAATGTAAACAAATGAAATTGGATGAGCTACCACTATATGATTTTGAAAAGCTTGAAACTGCCACAAACAGTTTTCATTTTAATAATATGCTTGGCAAGGGAGGTTTTGGCCCGGTATACAAGGGAGTCACGGAAGATGGTCAAGAAATTGCTGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTTGTAGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAAAGAGGAGAGAAAATGTTGGTCTATGAGTTCATGCCAAATAAAAGTTTGGATGCCTTTCTCTTTGATCCAATACAAAAGAAAAAGTTAGATTGGAGAAAGCGGTCGAACATAGTTGAAGGAATAGCTCGAGGAATAATGTATCTTCATAGAGACTCGAGACTTAAGATTATACACAGAGATTTAAAAGCAAGCAACATCTTACTTGATGATGAGATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGTGGAGAAGGTGATGAAGCTAACACAAAAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGGGGGACTTTTCTCAGAGAAATCAGATGTATATAGCTTTGGTGTTTTATTGCTAGAGATTGTAAGCGGACGAAGAAATAACAGCTTTTATCAAAATGAGGATTCTCTTAGCCTTGTTGGCTTTGCATGGAAGCTATGGTTAGAAGAAAATACTATATCCCTAATAGATCGAGAGGTATGGGATGCATCCTTTGAAAGCAGCATGTTGAGGTGCATGCACATAGGACTTCTTTGTGTGCAAGAACTTCCAAAAGAAAGACCAAGTATATCAACTGTTGTTTTGATGCTCATAAGTGAGATTACACATCTTCCACCTCCCGGTAAAGTTGCATTTGTTCACAACCAAAATTCTCGAAGTACAGAATCTTCTCAACAAAGTCATCGATCTAACTCAAACAACAATGTAACTTTGAGTGATGTCATTGGCAGGTAA 2469 0.3657 MAFLSHNINDLFITFLIFCTFYSCYSSTNNAITSSKSLKDNETITSNNTDLKLGFFSPLNSNNRYLGIWYINETNNIWIANRDQPLKDSNGIVTIHKDGNLVILNKPNGIIIWSTNISSSTNSTAKLDDAGNLILRDINSGATIWDSFTHPADSAVPSMKIASNKVTGKQIAFVARKSDNDPSSGHFTISVERLDVPEVFIWKDKKIYWRTGPWNGRVFLGTPRLSTEYLFGWRLGVDDDGTTFITYNFADKTMFGILSLTPHGTLKLIEYKNKKEHFRLEVDQNECDFYGKCGPFGNCDNSSVPNICSCFKGFEPKNLVEWSSRNWTNGCVRTAGMNLKCEMLKTGSNEFKQDGFLVNRNMKVPDFNERSAGNQDKCRTDCLVNCSCLAYAYDRYIGCVYWSGDLIGLQNFPHGGVDLFIRVPAELVKKEKGHKKGFLIISIAGGTGAFTLVVCAYLLWLRRSARHKGRQSRNLTTRECKQMKLDELPLYDFEKLETATNSFHFNNMLGKGGFGPVYKGVTEDGQEIAVKRLSKASGQGIEEFMNEVVVISKLQHRNLVRLLGCCVERGEKMLVYEFMPNKSLDAFLFDPIQKKKLDWRKRSNIVEGIARGIMYLHRDSRLKIIHRDLKASNILLDDEMIPKISDFGLARIVKGGEGDEANTKRVVGTYGYMPPEYAMGGLFSEKSDVYSFGVLLLEIVSGRRNNSFYQNEDSLSLVGFAWKLWLEENTISLIDREVWDASFESSMLRCMHIGLLCVQELPKERPSISTVVLMLISEITHLPPPGKVAFVHNQNSRSTESSQQSHRSNSNNNVTLSDVIGR* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0354 822 SMART ntp_6 351 423 IPR003609 -
Mtr8g0354 822 Gene3D Phosphorylase Kinase; domain 1 477 578 - -
Mtr8g0354 822 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0354 822 Pfam PAN-like domain 352 407 IPR003609 -
Mtr8g0354 822 Gene3D - 23 150 IPR036426 -
Mtr8g0354 822 MobiDBLite consensus disorder prediction 790 822 - -
Mtr8g0354 822 MobiDBLite consensus disorder prediction 791 822 - -
Mtr8g0354 822 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Mtr8g0354 822 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672|GO:0006468
Mtr8g0354 822 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Mtr8g0354 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mtr8g0354 822 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Mtr8g0354 822 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0354 822 CDD B_lectin 35 151 IPR001480 -
Mtr8g0354 822 SMART blect_4 35 151 IPR001480 -
Mtr8g0354 822 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Mtr8g0354 822 CDD STKc_IRAK 509 775 - -
Mtr8g0354 822 SUPERFAMILY Protein kinase-like (PK-like) 488 810 IPR011009 -
Mtr8g0354 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 820 - -
Mtr8g0354 822 PIRSF SRK 3 822 IPR024171 GO:0004674
Mtr8g0354 822 CDD PAN_AP_plant 348 424 - -
Mtr8g0354 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 216 IPR036426 -
Mtr8g0354 822 Pfam D-mannose binding lectin 77 177 IPR001480 -
Mtr8g0354 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0354 Mtr-Chr8 4024262 4029928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0354 452 817 Receptor kinase-like Gene Family AT4G23150 51.639 1.50e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g0354 PK_Tyr_Ser-Thr 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0354 - - mtr:MTR_8g013600 1389.4