Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0353 ATGGCTTTTCTACGTCATAATACAAATGACTTATTCATTACAGTCCTCATATTTTGCACCTTTTATTCATGTTATAGTGCAATCAATGACACCATTACACCATCCAAATCTCTCAAAGACAATGAAACAATAACCTCAAACAACACAAACTTCAAGCTAGGATTTTTCAGCCCATTAAATTCAACCAACCGTTACCTAGGAATTTGGTACATCAATGAGACCAACAATATATGGATTGCAAACAGAGATCAACCACTCAAAGATTCAAATGGAATAGTCACAATTCACAAAAATGGAAATCTTGTAATATTGAACAAACCAAATGGTGTTATTATATGGTCAACAAACATTTCATCTTCAACAAATTCAACAGCTCAACTTGCTGATTCAGGAAACTTGATTTTGAGAGATATCAGTTCTGGAGCAACAATCTGGGATAGTTTCACACACCCTGCAGATGCAGCTGTTCCAACAATGAGAATTGCAGCTAACCAAGTAACAGGTAAGAAAATATCCTTTGTATCAAGAAAAAGTGATAATGATCCTTCTTCAGGACATTATTCAGCTAGTCTTGAAAGATTGGATGCACCAGAAGTTTTCATTTGGTATGATAAGAAAATTCATTGGAGAACTGGTCCATGGAATGGATTGGTTTTTCTCGGAACACCGAGTATGTTAACCAAGTATTTACACGGTTGGCATTTTGTTCAAGACAATGATGGAACTACTTATATTACTTACAATTTCGCCGACAAAACTATGTTTGGAATTCTGTCATTGACACCACATGGAACACTTAAGTTGGTTGAGTATATGAATAAAAAGGAACTTCTTAGATTTGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGTGGGCCATTTGGTAACTGTGATAATTCTGTTGTGCCAATTTGTAGTTGTTTTGATGGGTTTGAGGCAAAGAATTCTGTGGAATGGAGTTTAGGAAATTGGACTAATGGTTGTGTGAGGAAAGAGGGATTGAACTTGAAGTGTGAGATGGTGAAGAATGGATCAACTGTAGTTAAGCAAGATGGATTTAAGGTGTATCATAATATGAAAGTTCCTGATTTTGCTGAGAGATTAAATGTTGATATAGATAAGTGTGGAGAAGATTGTTTGGCAAATTGTTCTTGTTTGGCATATGCATATGATCCTTCTATATTTTGTATGTATTGGACTGGAGAGTTAATTGATTTGCAGAAATTTCCTTATGGTGGAGTTGATCTCTTCATTCGAGTGCCGGGCGCAGAACTTGTTGCTGTTAAAAAGGAAAAAGGACACAACAAGAGTTTTTTAATCATTGTAATTGCTGGGGTGATAGGAGCACTTATCTTGGTTATATGTGCTTATCTTTTATGGAGGAAATGTTCTGCTAGGCATAAAGGAAGACAATCTCGAAACATGACTAGTAGAGAACATAAACAAATGAAATTGGATGAGCTACCACTGTATGACTTTGAAAAGCTTGAAACTGCTACAAACAGTTTTGACTATGGTAATATGCTTGGAAAAGGAGGTTTTGGCCCTGTATACAAGGGAATATTGGAAGATGGCCAAGAAATTGCTGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTTATGAACGAAGTAGTAGTGATTTCTAAACTTCAACATCGTAATCTTGTAAGACTTCTTGGTTGTTGTGTAGAAAGGGGGGAGCAAATGTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGTCTTTATCTTTGATCCGTTACAAAAGAAAAATTTAGATTGGAGAAAGCGGTCGAACATAGTTGAAGGAATAGCTCGAGGTATAATGTATCTTCATAGAGACTCAAGACTTAAGATTATACATAGAGATTTAAAAGCAAGCAATGTCTTACTTGATGGAGACATGATTCCAAAGATATCAGACTTTGGGTTAGCTAGAATTGTTAAAGGTGGAGAAGATGATGAAGCTAACACGAAAAGGGTTGTCGGAACTTATGGTTATATGCCGCCAGAATATGCAATGGAGGGGCTTTTCTCTGAGAAATCAGATGTATATAGCTTTGGGGTTTTATTGCTAGAGATTGTCAGTGGGCGAAGAAATACGAGCTTTTATCACAGCGAGGATTCACTTAGCCTTGTAGGCTTTGCATGGAAGCTATGGTTAGAAGAAAACATTATATCTCTAATAGATCCAGAGGTATGGGATGCATGTTTTGAGAGCAGCATGTTAAGGTGCATACACATAGGACTTCTTTGTGTGCAAGAACTTCCAAAAGAAAGACCAAGTATATCAACCGTAGTTTTGATGCTCATAAATGAGATAAGGCATCTTCCACCTCCAGGTAAAGTTGCATTTGTTCACAAGCAAAATTCAAAGAGTACTACAGAATCTTCTCAAAAGAGGCATCAATCTAACTCAAACAACAATGTAACTTTGAGTGATGTCACAGGCAGGTAA 2478 0.364 MAFLRHNTNDLFITVLIFCTFYSCYSAINDTITPSKSLKDNETITSNNTNFKLGFFSPLNSTNRYLGIWYINETNNIWIANRDQPLKDSNGIVTIHKNGNLVILNKPNGVIIWSTNISSSTNSTAQLADSGNLILRDISSGATIWDSFTHPADAAVPTMRIAANQVTGKKISFVSRKSDNDPSSGHYSASLERLDAPEVFIWYDKKIHWRTGPWNGLVFLGTPSMLTKYLHGWHFVQDNDGTTYITYNFADKTMFGILSLTPHGTLKLVEYMNKKELLRFEVDQNECDFYGKCGPFGNCDNSVVPICSCFDGFEAKNSVEWSLGNWTNGCVRKEGLNLKCEMVKNGSTVVKQDGFKVYHNMKVPDFAERLNVDIDKCGEDCLANCSCLAYAYDPSIFCMYWTGELIDLQKFPYGGVDLFIRVPGAELVAVKKEKGHNKSFLIIVIAGVIGALILVICAYLLWRKCSARHKGRQSRNMTSREHKQMKLDELPLYDFEKLETATNSFDYGNMLGKGGFGPVYKGILEDGQEIAVKRLSKASGQGIEEFMNEVVVISKLQHRNLVRLLGCCVERGEQMLVYEFMPNKSLDVFIFDPLQKKNLDWRKRSNIVEGIARGIMYLHRDSRLKIIHRDLKASNVLLDGDMIPKISDFGLARIVKGGEDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFYHSEDSLSLVGFAWKLWLEENIISLIDPEVWDACFESSMLRCIHIGLLCVQELPKERPSISTVVLMLINEIRHLPPPGKVAFVHKQNSKSTTESSQKRHQSNSNNNVTLSDVTGR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0353 825 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 823 - -
Mtr8g0353 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 823 - -
Mtr8g0353 825 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0353 825 Pfam PAN-like domain 351 408 IPR003609 -
Mtr8g0353 825 Gene3D Phosphorylase Kinase; domain 1 478 580 - -
Mtr8g0353 825 CDD PAN_AP_plant 352 423 - -
Mtr8g0353 825 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Mtr8g0353 825 CDD STKc_IRAK 511 777 - -
Mtr8g0353 825 SMART ntp_6 350 422 IPR003609 -
Mtr8g0353 825 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Mtr8g0353 825 Gene3D Transferase(Phosphotransferase) domain 1 581 784 - -
Mtr8g0353 825 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Mtr8g0353 825 Gene3D - 23 150 IPR036426 -
Mtr8g0353 825 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g0353 825 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Mtr8g0353 825 CDD B_lectin 35 151 IPR001480 -
Mtr8g0353 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Mtr8g0353 825 SUPERFAMILY Protein kinase-like (PK-like) 490 810 IPR011009 -
Mtr8g0353 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 216 IPR036426 -
Mtr8g0353 825 MobiDBLite consensus disorder prediction 794 825 - -
Mtr8g0353 825 SMART blect_4 35 151 IPR001480 -
Mtr8g0353 825 Pfam D-mannose binding lectin 77 177 IPR001480 -
Mtr8g0353 825 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Mtr8g0353 825 PIRSF SRK 4 825 IPR024171 GO:0004674
Mtr8g0353 825 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0353 Mtr-Chr8 4014236 4019562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0353 434 792 Receptor kinase-like Gene Family AT4G23230 52.778 6.43e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g0353 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0353 - - mtr:MTR_8g013600 1367.44