Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0336 ATGGCGATGAGGGTGATAGAGAAGAGTGAAGTTGCACCTCCACCTGGTTTAGTTCCCTCTCCAACCATTCTTCCCCTCACATTCTTGGACATTCCATGGTTTTGCTGTCGAACCATTAAACGCATCTTCTTCTACCACTTTCCTCATCCAACTCATCACTTTCTCCAAACAATACTTCCCATTCTCAAACACTCTCTTTCCATCACCCTCGAACACTTCTTTCCATACTCTTCCAATCTTATAATTCCTTCACATTCCGAAAATGTTCCCCCTTATATACGCTACCTCAATGGAGACTCTCTCTCCTTCACCATTGCTGAATCCTTAGCAAACTTCAACCTCCTTATTTCAGATTCTTCACAAGATGTTAAAAATTTGCACCCTTTTTTTCCGAACTTGCCTTCTCCTCATACTGAACACAATGACACACGCGTCGTCCCTCTAATGGCCATTCAAGTCACCATTCTACCTAACTCTGGATTCGCTATCTGCCTCACGTTTAACCACATTGCAGGTGATGGAAAATCACTTCACCAATTCATGAAACTCTGGTCATATGTTTCCAAAACCAAAACCATCAACAACAGATTATCTCTAGAACACTCTCTGCCTCTTGATCTTCTTCCTTCACATGAAAGAGATAGAGTTAGAGACCCAAAGAATCTTAAACTCACCTACTTACAAGAACTAAAAGATGTTATATCAAAATCCACCGGTCATGTGCAAGATTCTAATAATTATGTTAGCAAGGTTCGAATCACTTTAGTATTGAGCCATGAACAAGTTCTAAAACTCAAGAAATGGGTCGCTGATCATAGTTGTAAAGAAACTTCATTACAGAAACATATGTTGTCAACTTTTGTTGTAACATGTTCCTTGATTTGGTTTTGTTTGATAAAATCAGAGAAGCAAAGAAAAGGTTGTTGTGTTTTTGTGGATGGTGATGATCTATGCTACTTGGTATTTCATGCAGATTGTCGTGATAGTCCTGAAATTTCATTACCCAAAAATTATTTTGGAAATTGTCTTGCCAGTAAAATTGTGGTTGTAAAGAGGGCTGAGTTAGTTGGAACAAATGGGATTGTTGCGGCTGCAAATGGTATCGAAAGGAAGATAAGAGATTTCAAGAGTGATAATGCTTTGTTAGGTCCTAAATGGTGGACTTCTGATCATAGTGAATTATCAAAACCTGGTAAGTCTGTTGTAGGAATTGCTGGCTCACCTAAATTTGATGTTTATGAGACTGACTTCGGGTGGGGGAAGCCTAAAAAATCTGATGCAGTTCATCTTGATTCGTCGTCTTCGATTTCTATTTCTCTTTCTGATTGTAGAGATGGTGGAGGTGGAATTCAGGTTGGTTTGGCTCTTGAGGAGATTCAAATGACTAATTTCAGCAAAATCTTCCAACAACAAGTTGATCAGATTTGTTTGTAG 1434 0.3891 MAMRVIEKSEVAPPPGLVPSPTILPLTFLDIPWFCCRTIKRIFFYHFPHPTHHFLQTILPILKHSLSITLEHFFPYSSNLIIPSHSENVPPYIRYLNGDSLSFTIAESLANFNLLISDSSQDVKNLHPFFPNLPSPHTEHNDTRVVPLMAIQVTILPNSGFAICLTFNHIAGDGKSLHQFMKLWSYVSKTKTINNRLSLEHSLPLDLLPSHERDRVRDPKNLKLTYLQELKDVISKSTGHVQDSNNYVSKVRITLVLSHEQVLKLKKWVADHSCKETSLQKHMLSTFVVTCSLIWFCLIKSEKQRKGCCVFVDGDDLCYLVFHADCRDSPEISLPKNYFGNCLASKIVVVKRAELVGTNGIVAAANGIERKIRDFKSDNALLGPKWWTSDHSELSKPGKSVVGIAGSPKFDVYETDFGWGKPKKSDAVHLDSSSSISISLSDCRDGGGGIQVGLALEEIQMTNFSKIFQQQVDQICL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0336 477 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 3 476 - -
Mtr8g0336 477 PANTHER - 3 476 - -
Mtr8g0336 477 Gene3D - 3 241 IPR023213 -
Mtr8g0336 477 Pfam Transferase family 23 468 - -
Mtr8g0336 477 Gene3D - 248 475 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0336 Mtr-Chr8 3697376 3698809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0336 61 468 Monolignol Biosynthesis Gene Families AT5G48930 20.930 6.09e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0336 - - mtr:MTR_2g089670 572.778