Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0309 ATGGGCATTTCCAGAGATAGTAGAGATAAAAGGCTTGCAACTGGCGGCAAGAGGAAGACATGCATCAAGAAGAGAAAGTATGAGCTCGGTCGCCAGCCAGCTAACACCAAGCTATCAAGCAACAAAACAGTGCGGAGTATTCGTGTTAGAGGTGGCAATTTGAAATGTAGAGCTTTGAGGTTGGATACTGGAAACATCTCATGGGGAAGTGAGGCTGTCACTCGGAAATCCCGTTTGCTAAATGTGGTTTACAATGCTTCCAACAACGAGCTTGTGCGAACTCAGACTCTTGTTAAGAGCGCTATTGTGCAGGTCGATGCTGCTCCGTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATTGGTAACAAAAAGAAAACTGCTGCCAAACAGGACTCTGCAAAGGAGGCTGAAGCTGCTACAGAAGAAACCAAAAAGAGTAACCATGTGCTGAGGAAATTGGAGAATCGCGAGAAAGATCGCCAGCTCGATGCTCACATTGAAGAGCAGTTTGGTGGTGGACGATTACTTGCGTGCATTTCTTCTCGACCTGGTCAATGTGGCAGGGCTGATGGCTACATTTTGGAAGGTAAGGAGTTGGAATTCTACATGAAGAAACTCCAGAGAAAGAAGGGCAAGAGTGCCGCTTGA 654 0.4648 MGISRDSRDKRLATGGKRKTCIKKRKYELGRQPANTKLSSNKTVRSIRVRGGNLKCRALRLDTGNISWGSEAVTRKSRLLNVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGNKKKTAAKQDSAKEAEAATEETKKSNHVLRKLENREKDRQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0309 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Mtr8g0309 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr8g0309 217 Coils Coil 138 158 - -
Mtr8g0309 217 PANTHER RIBOSOMAL PROTEIN S8E FAMILY PROTEIN 1 216 - -
Mtr8g0309 217 CDD Ribosomal_S8e_like 5 196 - -
Mtr8g0309 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr8g0309 217 Gene3D Ribosomal protein S8e, subdomain 113 175 IPR042563 -
Mtr8g0309 217 Gene3D - 26 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0309 Mtr-Chr8 3401537 3404162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0309 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 79.024 1.27e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0309 K02995 - gmx:100813170 369.777