Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0308 ATGGGTATTTCACGAGATTCTATGCACAAGAGACGTGAAACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTACGAGCTCGGTCGCCAGCCAGCTAACACAAAACTATCAAGCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCTCTGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCAAAACCCGTTTGCTCGATGTGGTGTACAATGCTTCCAACAATGAGTTGGTGCGAACTCAGACTCTTGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCCTTCAAGCAATGGTACCTTCAACACTATGGTGTTGATATTGGTAGAAAGAAGAAAAATGTTAGCAAGAAAGAGGAGGAGGCTGAGGCTGCTACAGAAGAAGTCAAAAAGAGTGCCCATGTGCAGAGAAAATTAGAGCAACGCCAGAAAGAACGCCAGCTTGATGCCCACATTGAGGAGCAGTTTGGTGGTGGACGATTGCTTGCATGCATTTCTTCTCGACCTGGTCAATGCGGCAGAGCTGATGGCTACATTCTTGAAGGTAAGGAGCTAGAATTCTACATGAAGAAACTCCAGAAGAAGAAGGGCAAGGGTGCCGCTTGA 648 0.4707 MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKNVSKKEEEAEAATEEVKKSAHVQRKLEQRQKERQLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0308 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 - -
Mtr8g0308 215 MobiDBLite consensus disorder prediction 1 35 - -
Mtr8g0308 215 Gene3D - 26 112 - -
Mtr8g0308 215 TIGRFAM eS8: ribosomal protein eS8 1 196 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr8g0308 215 CDD Ribosomal_S8e_like 5 194 - -
Mtr8g0308 215 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mtr8g0308 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mtr8g0308 215 Coils Coil 122 142 - -
Mtr8g0308 215 Pfam Ribosomal protein S8e 5 194 IPR022309 -
Mtr8g0308 215 Gene3D Ribosomal protein S8e, subdomain 113 173 IPR042563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0308 Mtr-Chr8 3394984 3397661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0308 1 203 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.714 2.95e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0308 K02995 - qsu:111988287 346.665