Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0303 ATGTATTCATCTTCATCATCATCTTCCACAAATCCACAATATCTCCATGACGTATTCATCAACTTCAGAGGCGAAGACGTTCGTCGCACCTTCGTCTCTCATCTCTACGCAGTCCTCTCAAACGCCGGAATCAACACATTCCTTGACAACGAAAAGCTCGAAAAAGGCGAAGATATCGGACACGAACTTCTCCAAGCAATTTCAGTCTCACGCATATCCATAATCGTTTTCTCTAAAAACTACACTGAATCGAGTTGGTGTTTAAACGAATTGGAAAAGATCATGGAATGTCGTAGACTTCACGGTCATGTTGTTTTGCCAGTGTTTTATGATGTTGATCCTTCTGTTGTACGGCATCAGAAAGGTGATTTTGGTAAAGCTTTGGAAGTTGCCGCGAAAAGTAGGTATATTATTGAGGAAGTTATGGTGAAGGAATTGGGTAAATGGAGAAAAGTGTTGACGGAAGCTTCGAATTTGTCTGGTTGGGATGGAAGCGCTTTCAGGAGTGACCGTGAATTAGTGAAAAAAATTGTTGAGGCCATTTTGCCAAAACTCGACAACACAACCTTGTCTATAACTGAATTTCCAGTTGGATTAGAATCCCATGTAAAGCAAGTGGTTGGGGTGATTGAGAAACATTCGGGCGATGTTTGTATGGTAGGGATCTGGGGCATGGGAGGATCAGGTAAAACAACTGTAGCCAAAGCCATCTACAATGAAATTCATCGTAGATTTGATTGTACTAGTTTCATTGAAAACATTAGAGAAGTTTGTGAAAAGGATACTAAAGGGCATATACATTTACAACAGCAACTTCTTTCAGATGTCCTCAAAACAAAGGAGAAAATACATAGTATTGCGTCGGGGACAGCTACGATCCAGAGAGAGCTTACCGGAAAGAAAGCACTCGTGATACTTGATGATGTGACTGATTTTCAGCAAATAAAAGCCCTATGCGGAAATCATAAATTTTTTGGTGCTGGAAGTGTGTTAATTGTTACAACCAGAGATGTACACATACTTAAGCTACTCAATGTTGACTCTGTCTATAAAATGGAGGAAATGCAGAAAAACGAGTCCCTTGAACTATTCTCTTGGCATGCTTTTAGAAAAGCTAGTCCTAGAGGAGGCTTTAGTGAACTCTCAAGAAATGTGGCTGCTTATTGTGGAGGGTTACCACTGGCTCTTGAAGTCCTTGGATCCTACTTATTTGAGAGGACAAAACAAGAATGGATAAGCGTACTATCAAAGTTAGAGAGAATTCCCAATGATCAAGTGCACGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGATATGGTAAAGGATATATTTCTTGACATTTGTTGTTTCTTTATTGGTAAGGACAGGGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAGCGGTCCTCATAGACCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGCTTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTCCGTGAAAGTTCAGCAAGAGAACCTGGGAAGCGTAGTCGATTGTGGTTTCACGAGGATGTACATGATGTTTTGGCAAAAAATACTGGAACAGAAACTGTTGAGGCACTGATTTTTAACTTGCAAAGAACAGGCAGAGGTAGCTTTAGTACTAATACTTTCCAAGATATGAAGAAACTTAGACTTTTACAACTTGATCGTGTTGACCTCACTGGAGATTTTGGGTATCTTTCCAAACAATTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTTTGTACCCAACGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAATATAGCAATGTTAAACAAGTTTGGAAGGAAACCAAGTTGTTGCATAAGCTAAAAATTCTCAATCTCAGTCATTCCAAGCACTTGAAAAGAACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAACTCATTATGAAGGATTGTCAAAGTTTATCCGACATACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTCATAAATTTGAAGGATTGTGCAAGTCTTGTTAATCTCCCAAGAGAGATCTATCGATTGAGATCAGTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGTCAAATTGGAAGAAGATATAGTGCAAATGAAATCCTTGACAACTCTAATTGCAGAAAATGCTGGTGTCAAACAAGTGCCTTTTTCGATTGTTAGATCAAAGAACATCACCCATATATCTCTATGTGGATATCAAGGATTATCACGTGATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAACTCCTTAGCACGTATTCCCTCTTTTGGTGGAATTTCAATGTCTCTTGTTTCCTTGAATATTGATAGTGATAATCTGGGTTTGGTCTATCAATCACCGATACTTAGCAGCTGTTCAAAACTTAGATGTGTTTCGGTACAATGTCACTCAGAGATTCAACTTAAACAAGAATTGAAAGTATTTCTTAATGATCTTACAGAGTTGGAAATATCACATGCTTCACAAATCTCAGATCTTTCCTTGCAATCTCTTTTGATTGGAATGGGAAGTTACCACAAAGTCAACGAGACTCTTGGCAAGAGCTTATCGCAGGGATTGGCAACTAATGATTCTCGTGCTTCGTTCCTTCCGGGTAACAATATTCCTTCTTGGTTAGCCTATACATGTGAGGGACCATCAGTATGTTTTCAAGTGCCCAAGGATAGTAATTGTGGAATGAAGGGAATAACTTTATGTGTTCTTTATTCATCTACACTTAAAAACATGGCAACTGAATGTCTCACTAGTGTCTTGATCATTAATTACACAAAATTCACTATTCATATATACAAGAGAGACACAGTAATGACCTTTAACGATGAAGATTGGGAAGGTGTAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTTTTGGGCATGGATTGACTGCTAAGGAGACCGCTGTCTATCTAATATATGATCAGTCAACTGCAATGGAAATTGAGTCATCAATTGCTATGGAAGTTGAACCAATACCTGAAGTGCAGGTGCAATCATCACCTGATGTGGTAATGGAACTATCACCTGGAGTGGAAGCACAACCATCATCTGATGTGGAAACGGAATCACCAATAGCTGTCAAGAGCGAGCCAATACCAAAGCCAAATGATAAAATCTTTGTAAAACTTGCAAAGAGAGTGGGAGGATGTTTATGCTTGAACCAGAATTGA 3276 0.388 MYSSSSSSSTNPQYLHDVFINFRGEDVRRTFVSHLYAVLSNAGINTFLDNEKLEKGEDIGHELLQAISVSRISIIVFSKNYTESSWCLNELEKIMECRRLHGHVVLPVFYDVDPSVVRHQKGDFGKALEVAAKSRYIIEEVMVKELGKWRKVLTEASNLSGWDGSAFRSDRELVKKIVEAILPKLDNTTLSITEFPVGLESHVKQVVGVIEKHSGDVCMVGIWGMGGSGKTTVAKAIYNEIHRRFDCTSFIENIREVCEKDTKGHIHLQQQLLSDVLKTKEKIHSIASGTATIQRELTGKKALVILDDVTDFQQIKALCGNHKFFGAGSVLIVTTRDVHILKLLNVDSVYKMEEMQKNESLELFSWHAFRKASPRGGFSELSRNVAAYCGGLPLALEVLGSYLFERTKQEWISVLSKLERIPNDQVHEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKLGMHDLIRDMGREIVRESSAREPGKRSRLWFHEDVHDVLAKNTGTETVEALIFNLQRTGRGSFSTNTFQDMKKLRLLQLDRVDLTGDFGYLSKQLRWVNWQRSTFNFVPNDFDQENLVAFELKYSNVKQVWKETKLLHKLKILNLSHSKHLKRTPDFSKLPNLEKLIMKDCQSLSDIHPSIGDLKNLLLINLKDCASLVNLPREIYRLRSVKTLILSGCSKIVKLEEDIVQMKSLTTLIAENAGVKQVPFSIVRSKNITHISLCGYQGLSRDVFPSIIWSWMSPTMNSLARIPSFGGISMSLVSLNIDSDNLGLVYQSPILSSCSKLRCVSVQCHSEIQLKQELKVFLNDLTELEISHASQISDLSLQSLLIGMGSYHKVNETLGKSLSQGLATNDSRASFLPGNNIPSWLAYTCEGPSVCFQVPKDSNCGMKGITLCVLYSSTLKNMATECLTSVLIINYTKFTIHIYKRDTVMTFNDEDWEGVVSNLGVGDNVEIFVAFGHGLTAKETAVYLIYDQSTAMEIESSIAMEVEPIPEVQVQSSPDVVMELSPGVEAQPSSDVETESPIAVKSEPIPKPNDKIFVKLAKRVGGCLCLNQN* 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0303 1091 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 1007 - -
Mtr8g0303 1091 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 449 IPR027417 -
Mtr8g0303 1091 SMART till_3 15 159 IPR000157 GO:0007165
Mtr8g0303 1091 Gene3D - 191 349 IPR027417 -
Mtr8g0303 1091 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1007 IPR044974 GO:0006952
Mtr8g0303 1091 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
Mtr8g0303 1091 Gene3D - 354 438 IPR042197 -
Mtr8g0303 1091 Gene3D Ribonuclease Inhibitor 529 875 IPR032675 -
Mtr8g0303 1091 SUPERFAMILY L domain-like 495 859 - -
Mtr8g0303 1091 Gene3D - 10 190 IPR035897 -
Mtr8g0303 1091 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 162 IPR035897 -
Mtr8g0303 1091 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Mtr8g0303 1091 Pfam TIR domain 16 193 IPR000157 GO:0007165
Mtr8g0303 1091 PRINTS Disease resistance protein signature 219 234 - -
Mtr8g0303 1091 PRINTS Disease resistance protein signature 296 310 - -
Mtr8g0303 1091 PRINTS Disease resistance protein signature 389 403 - -
Mtr8g0303 1091 PRINTS Disease resistance protein signature 627 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0303 Mtr-Chr8 3319741 3325796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0303 16 767 WRKY Transcription Factor Family AT4G12020 29.723 6.07e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0303 - - mtr:MTR_2g437560 1336.63